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IDs: 20022141 [UID] 50767108 [GenBank] 55856698 [RefSeq]
The assembly odHalPani1.1 is based on 221x PacBio data and Arima2 Hi-C data generated by the Aquatic Symbiosis Genomics Project (https://www.aquaticsymbiosisgenomics.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm, retained haplotig separation ... with purge_dups, and Hi-C based scaffolding with YaHS. The mitochondrial genome was assembled using MitoHiFi. Finally, the primary assembly was analysed and manually improved using gEVAL. Chromosome-scale scaffolds confirmed by the Hi-C data have been named in order of size. more
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