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CSIRO-AGI_Acam_v1.1

Organism name:
Ochlerotatus camptorhynchus (mosquitos)
Isolate:
MF236.1
Sex:
female
BioSample:
SAMN39488852
BioProject:
PRJNA1066484
Submitter:
CSIRO Applied Genomics Initiative
Date:
2024/03/15
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_037179485.2 (latest)
RefSeq assembly accession:
GCF_037179485.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Different: number of assembly-units
  • Data displayed for RefSeq version
WGS Project:
JBBEFR01
Assembly method:
Mabs v. 2.24
Expected final version:
yes
Genome coverage:
44.0x
Sequencing technology:
PacBio Revio

IDs: 22440141 [UID] 56744608 [GenBank] 57715958 [RefSeq]

See Genome Information for Ochlerotatus camptorhynchus

History (Show revision history)

Comment

In April 2024 9 sequences were suppressed because they were found to be contaminants.

Global statistics

Total sequence length1,079,575,157
Total ungapped length1,079,575,157
Number of contigs1,240
Contig N503,340,748
Contig L5097
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,240

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,079,575,1571,2401,079,575,1573,340,74800