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Source database (GenBank or RefSeq) File type

ASM3712646v1

Organism name:

Ornithodoros turicata (mites & ticks)

Isolate:

Travis

Sex:

female

BioSample:

SAMN27925140

BioProject:

PRJNA832905

Submitter:

United States Department of Agriculture

Date:

2024/03/13

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_037126465.1 (latest)

RefSeq assembly accession:

GCF_037126465.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAZGRI01

Assembly method:

HiFiASM v. July-2023

Expected final version:

yes

Genome coverage:

30.0x

Sequencing technology:

PacBio Sequel

IDs: 21841911 [UID] 54942158 [GenBank] 56672828 [RefSeq]

See Genome Information for Ornithodoros turicata

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_037126465.1	≠	GCF_037126465.1	ASM3712646v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	1,071,364,447
Total ungapped length	1,071,279,947
Gaps between scaffolds	0
Number of scaffolds	379
Scaffold N50	84,440,111
Scaffold L50	4
Number of contigs	1,224
Contig N50	2,677,430
Contig L50	91
Total number of chromosomes and plasmids	11
Number of component sequences (WGS or clone)	379

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM073695.1	=	NC_088201.1	0
Chromosome 2	CM073696.1	=	NC_088202.1	0
Chromosome 3	CM073697.1	=	NC_088203.1	0
Chromosome 4	CM073698.1	=	NC_088204.1	0
Chromosome 5	CM073699.1	=	NC_088205.1	0
Chromosome 6	CM073700.1	=	NC_088206.1	0
Chromosome 7	CM073701.1	=	NC_088207.1	0
Chromosome 8	CM073702.1	=	NC_088208.1	0
Chromosome 9	CM073703.1	=	NC_088209.1	0
Chromosome 10	CM073704.1	=	NC_088210.1	0
unplaced	n/a	n/a	n/a	368

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	1,071,349,989	378	1,071,265,489	84,440,111	845
Chromosome 1	235,596,939	1	235,576,739	235,596,939	202
Chromosome 2	150,342,175	1	150,332,975	150,342,175	92
Chromosome 3	108,618,500	1	108,613,800	108,618,500	47
Chromosome 4	83,779,437	1	83,773,937	83,779,437	55
Chromosome 5	84,440,111	1	84,436,711	84,440,111	34
Chromosome 6	74,607,816	1	74,600,816	74,607,816	70
Chromosome 7	59,514,574	1	59,511,774	59,514,574	28
Chromosome 8	42,056,132	1	42,053,032	42,056,132	31
Chromosome 9	44,835,408	1	44,832,008	44,835,408	34
Chromosome 10	36,058,860	1	36,056,360	36,058,860	25
unplaced	151,500,037	368	151,477,337	1,175,497	227

Assembly

Genome Assembly

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ASM3712646v1

See Genome Information for Ornithodoros turicata

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear