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CU_Pguttatus_1

Organism name:
Pantherophis guttatus (snakes)
Isolate:
1
Sex:
male
BioSample:
SAMN25637154
BioProject:
PRJNA803176
Submitter:
Columbia University
Date:
2023/03/31
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_029531705.1 (latest)
RefSeq assembly accession:
GCF_029531705.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAKNRS01
Assembly method:
Canu v. 2.1.1
Expected final version:
yes
Genome coverage:
70.0x
Sequencing technology:
PacBio

IDs: 16333551 [UID] 41864218 [GenBank] 49227548 [RefSeq]

See Genome Information for Pantherophis guttatus

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,708,105,946
Total ungapped length1,649,955,141
Gaps between scaffolds0
Number of scaffolds466
Scaffold N5063,228,677
Scaffold L5010
Number of contigs4,019
Contig N503,031,475
Contig L50142
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)466

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,708,105,9464661,649,955,14163,228,6773,5530