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Source database (GenBank or RefSeq) File type

UOR_Ptae_1.2

Organism name:

Phyllopteryx taeniolatus (common seadragon)

Isolate:

TA_2022b

Sex:

female

BioSample:

SAMN28950364

BioProject:

PRJNA765702

Submitter:

University of Oregon

Date:

2022/08/03

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_024500385.1 (latest)

RefSeq assembly accession:

GCF_024500385.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAMWDW01

Assembly method:

Flye v. 2.4.2; Juicer v. BETA; 3D-DNA v. 180419

Expected final version:

yes

Genome coverage:

136.0x

Sequencing technology:

PacBio Sequel

IDs: 13418541 [UID] 35018248 [GenBank] 51260348 [RefSeq]

See Genome Information for Phyllopteryx taeniolatus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_024500385.1	≠	GCF_024500385.1	UOR_Ptae_1.2	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	652,173,514
Total ungapped length	652,169,594
Gaps between scaffolds	0
Number of scaffolds	1,259
Scaffold N50	31,005,324
Scaffold L50	10
Number of contigs	1,455
Contig N50	9,935,855
Contig L50	22
Total number of chromosomes and plasmids	24
Number of component sequences (WGS or clone)	1,259

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM044774.1	=	NC_084502.1	0
Chromosome 2	CM044775.1	=	NC_084503.1	0
Chromosome 3	CM044776.1	=	NC_084504.1	0
Chromosome 4	CM044777.1	=	NC_084505.1	0
Chromosome 5	CM044778.1	=	NC_084506.1	0
Chromosome 6	CM044779.1	=	NC_084507.1	0
Chromosome 7	CM044780.1	=	NC_084508.1	0
Chromosome 8	CM044781.1	=	NC_084509.1	0
Chromosome 9	CM044782.1	=	NC_084510.1	0
Chromosome 10	CM044783.1	=	NC_084511.1	0
Chromosome 11	CM044784.1	=	NC_084512.1	0
Chromosome 12	CM044785.1	=	NC_084513.1	0
Chromosome 13	CM044786.1	=	NC_084514.1	0
Chromosome 14	CM044787.1	=	NC_084515.1	0
Chromosome 15	CM044788.1	=	NC_084516.1	0
Chromosome 16	CM044789.1	=	NC_084517.1	0
Chromosome 17	CM044790.1	=	NC_084518.1	0
Chromosome 18	CM044791.1	=	NC_084519.1	0
Chromosome 19	CM044792.1	=	NC_084520.1	0
Chromosome 20	CM044793.1	=	NC_084521.1	0
Chromosome 21	CM044794.1	=	NC_084522.1	0
Chromosome 22	CM044795.1	=	NC_084523.1	0
Chromosome 23	CM044796.1	=	NC_084524.1	0
unplaced	n/a	n/a	n/a	1,235

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	652,157,009	1,258	652,153,089	31,005,324	196
Chromosome 1	51,083,034	1	51,082,734	51,083,034	15
Chromosome 2	40,914,194	1	40,913,674	40,914,194	26
Chromosome 3	33,871,086	1	33,870,846	33,871,086	12
Chromosome 4	33,744,093	1	33,743,953	33,744,093	7
Chromosome 5	33,581,482	1	33,581,242	33,581,482	12
Chromosome 6	33,072,496	1	33,072,416	33,072,496	4
Chromosome 7	32,137,493	1	32,137,413	32,137,493	4
Chromosome 8	32,042,239	1	32,042,199	32,042,239	2
Chromosome 9	31,990,137	1	31,989,957	31,990,137	9
Chromosome 10	31,005,324	1	31,005,044	31,005,324	14
Chromosome 11	29,489,635	1	29,489,355	29,489,635	14
Chromosome 12	27,388,673	1	27,388,573	27,388,673	5
Chromosome 13	27,180,410	1	27,180,270	27,180,410	7
Chromosome 14	27,072,886	1	27,072,766	27,072,886	6
Chromosome 15	23,884,239	1	23,884,139	23,884,239	5
Chromosome 16	23,450,445	1	23,450,145	23,450,445	15
Chromosome 17	22,448,000	1	22,447,880	22,448,000	6
Chromosome 18	19,424,177	1	19,424,097	19,424,177	4
Chromosome 19	19,058,862	1	19,058,802	19,058,862	3
Chromosome 20	17,236,897	1	17,236,897	17,236,897	0
Chromosome 21	17,160,313	1	17,160,153	17,160,313	8
Chromosome 22	10,962,381	1	10,962,301	10,962,381	4
Chromosome 23	8,509,314	1	8,509,174	8,509,314	7
unplaced	25,449,199	1,235	25,449,059	157,502	7

Assembly

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UOR_Ptae_1.2

See Genome Information for Phyllopteryx taeniolatus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

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Assembly Unit Name
Primary Assembly
non-nuclear