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Source database (GenBank or RefSeq) File type

UT_GWSS_2.1

Organism name:

Homalodisca vitripennis (glassy-winged sharpshooter)

Isolate:

AUS2020

Sex:

pooled male and female

BioSample:

SAMN22783162

BioProject:

PRJNA776266

Submitter:

University of Texas at Austin

Date:

2022/01/26

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_021130785.2 (latest)

RefSeq assembly accession:

GCF_021130785.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAJKGG02

Assembly method:

WTDBG2 v. 2.5

Expected final version:

yes

Genome coverage:

183.0x

Sequencing technology:

PacBio

IDs: 11816391 [UID] 31126728 [GenBank] 31189948 [RefSeq]

See Genome Information for Homalodisca vitripennis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_021130785.2	≠	GCF_021130785.1	UT_GWSS_2.1	Chromosome	Latest GenBank, Latest RefSeq
GCA_021130785.1	n/a	n/a	UT_GWSS_2.0	Chromosome	Replaced GenBank

Comment

Global statistics

Total sequence length	2,305,003,542
Total ungapped length	2,305,003,542
Gaps between scaffolds	0
Number of scaffolds	14,904
Scaffold N50	168,834,166
Scaffold L50	6
Number of contigs	14,904
Contig N50	168,834,166
Contig L50	6
Total number of chromosomes and plasmids	10
Number of component sequences (WGS or clone)	14,904

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM037686.2	=	NC_060207.1	0
Chromosome 2	CM037687.2	=	NC_060208.1	0
Chromosome 3	CM037688.2	=	NC_060209.1	0
Chromosome 4	CM037689.2	=	NC_060210.1	0
Chromosome 5	CM037690.2	=	NC_060211.1	0
Chromosome 6	CM037691.2	=	NC_060212.1	0
Chromosome 7	CM037692.2	=	NC_060213.1	0
Chromosome 8	CM037693.2	=	NC_060214.1	0
Chromosome X	CM037694.2	=	NC_060215.1	0
unplaced	n/a	n/a	n/a	14,894

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50
All	2,304,988,238	14,903	2,304,988,238	168,834,166
Chromosome 1	251,804,026	1	251,804,026	251,804,026
Chromosome 2	238,757,426	1	238,757,426	238,757,426
Chromosome 3	211,258,354	1	211,258,354	211,258,354
Chromosome 4	206,277,168	1	206,277,168	206,277,168
Chromosome 5	186,394,357	1	186,394,357	186,394,357
Chromosome 6	168,834,166	1	168,834,166	168,834,166
Chromosome 7	148,585,955	1	148,585,955	148,585,955
Chromosome 8	132,882,420	1	132,882,420	132,882,420
Chromosome X	162,104,374	1	162,104,374	162,104,374
unplaced	598,089,992	14,894	598,089,992	59,690

Assembly

Genome Assembly

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Download Assembly

UT_GWSS_2.1

See Genome Information for Homalodisca vitripennis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Assembly statistics

Assembly Unit Name
Primary Assembly
non-nuclear