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Source database (GenBank or RefSeq) File type

MaoHua_MHT

Organism name:

Actinidia eriantha (eudicots)

Isolate:

MHT-2021

BioSample:

SAMN18715780

BioProject:

PRJNA721303

Submitter:

Zhejiang University

Date:

2021/07/13

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_019202715.1 (latest)

RefSeq assembly accession:

GCF_019202715.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome Pltd

Data displayed for RefSeq version

WGS Project:

JAHSQF01

Assembly method:

FALCON v. 0.3.0

Expected final version:

yes

Genome coverage:

100.0x

Sequencing technology:

Illumina HiSeq; PacBio Sequel

IDs: 10489871 [UID] 27844768 [GenBank] 43684918 [RefSeq]

See Genome Information for Actinidia eriantha

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_019202715.1	≠	GCF_019202715.1	MaoHua_MHT	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	657,254,080
Total ungapped length	654,875,566
Gaps between scaffolds	0
Number of scaffolds	88
Scaffold N50	22,298,404
Scaffold L50	14
Number of contigs	797
Contig N50	1,659,789
Contig L50	128
Total number of chromosomes and plasmids	30
Number of component sequences (WGS or clone)	88

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM032970.1	=	NC_080133.1	0
Chromosome 2	CM032971.1	=	NC_080134.1	0
Chromosome 3	CM032972.1	=	NC_080135.1	0
Chromosome 4	CM032973.1	=	NC_080136.1	0
Chromosome 5	CM032974.1	=	NC_080137.1	0
Chromosome 6	CM032975.1	=	NC_080138.1	0
Chromosome 7	CM032976.1	=	NC_080139.1	0
Chromosome 8	CM032977.1	=	NC_080140.1	0
Chromosome 9	CM032978.1	=	NC_080141.1	0
Chromosome 10	CM032979.1	=	NC_080142.1	0
Chromosome 11	CM032980.1	=	NC_080143.1	0
Chromosome 12	CM032981.1	=	NC_080144.1	0
Chromosome 13	CM032982.1	=	NC_080145.1	0
Chromosome 14	CM032983.1	=	NC_080146.1	0
Chromosome 15	CM032984.1	=	NC_080147.1	0
Chromosome 16	CM032985.1	=	NC_080148.1	0
Chromosome 17	CM032986.1	=	NC_080149.1	0
Chromosome 18	CM032987.1	=	NC_080150.1	0
Chromosome 19	CM032988.1	=	NC_080151.1	0
Chromosome 20	CM032989.1	=	NC_080152.1	0
Chromosome 21	CM032990.1	=	NC_080153.1	0
Chromosome 22	CM032991.1	=	NC_080154.1	0
Chromosome 23	CM032992.1	=	NC_080155.1	0
Chromosome 24	CM032993.1	=	NC_080156.1	0
Chromosome 25	CM032994.1	=	NC_080157.1	0
Chromosome 26	CM032995.1	=	NC_080158.1	0
Chromosome 27	CM032996.1	=	NC_080159.1	0
Chromosome 28	CM032997.1	=	NC_080160.1	0
Chromosome 29	CM032998.1	=	NC_080161.1	0
unplaced	n/a	n/a	n/a	58

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	657,097,116	87	654,718,602	22,298,404	709
Chromosome 1	22,573,930	1	22,486,787	22,573,930	25
Chromosome 2	19,700,066	1	19,625,674	19,700,066	21
Chromosome 3	27,196,196	1	26,956,105	27,196,196	52
Chromosome 4	14,991,634	1	14,894,048	14,991,634	24
Chromosome 5	22,776,814	1	22,660,874	22,776,814	31
Chromosome 6	21,379,265	1	21,343,766	21,379,265	16
Chromosome 7	23,898,941	1	23,825,241	23,898,941	32
Chromosome 8	27,636,444	1	27,479,895	27,636,444	46
Chromosome 9	17,746,271	1	17,723,542	17,746,271	8
Chromosome 10	22,449,998	1	22,334,508	22,449,998	30
Chromosome 11	18,394,388	1	18,338,270	18,394,388	18
Chromosome 12	22,929,671	1	22,840,464	22,929,671	30
Chromosome 13	20,746,160	1	20,686,890	20,746,160	15
Chromosome 14	21,550,431	1	21,451,434	21,550,431	26
Chromosome 15	19,420,416	1	19,372,889	19,420,416	18
Chromosome 16	27,234,901	1	27,111,301	27,234,901	37
Chromosome 17	20,509,576	1	20,480,155	20,509,576	9
Chromosome 18	24,064,625	1	23,968,786	24,064,625	28
Chromosome 19	24,909,723	1	24,811,329	24,909,723	28
Chromosome 20	20,657,110	1	20,590,687	20,657,110	19
Chromosome 21	18,643,501	1	18,599,377	18,643,501	12
Chromosome 22	22,298,404	1	22,238,529	22,298,404	22
Chromosome 23	22,794,972	1	22,755,958	22,794,972	19
Chromosome 24	19,718,581	1	19,671,209	19,718,581	15
Chromosome 25	23,070,020	1	22,995,755	23,070,020	27
Chromosome 26	19,741,879	1	19,668,570	19,741,879	22
Chromosome 27	23,778,080	1	23,707,881	23,778,080	23
Chromosome 28	18,771,426	1	18,722,897	18,771,426	23
Chromosome 29	20,238,636	1	20,194,494	20,238,636	16
unplaced	27,275,057	58	27,181,287	570,277	17

Assembly

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MaoHua_MHT

See Genome Information for Actinidia eriantha

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Global assembly definition

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Assembly Unit Name
Primary Assembly
non-nuclear