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Source database (GenBank or RefSeq) File type

ASM1832078v1

Organism name:

Cheilinus undulatus (humphead wrasse)

Sex:

female

BioSample:

SAMN14532944

BioProject:

PRJNA622923

Submitter:

Shanghai Ocean University

Date:

2021/05/12

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_018320785.1 (latest)

RefSeq assembly accession:

GCF_018320785.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAGUQY01

Assembly method:

SMART denovo v. 2.0

Expected final version:

yes

Genome coverage:

77.0x

Sequencing technology:

Oxford Nanopore

IDs: 10038171 [UID] 26697338 [GenBank] 26833378 [RefSeq]

See Genome Information for Cheilinus undulatus

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_018320785.1	≠	GCF_018320785.1	ASM1832078v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	1,173,472,134
Total ungapped length	1,173,443,734
Gaps between scaffolds	0
Number of scaffolds	46
Scaffold N50	51,466,935
Scaffold L50	11
Number of contigs	330
Contig N50	16,477,222
Contig L50	21
Total number of chromosomes and plasmids	25
Number of component sequences (WGS or clone)	46

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Linkage Group 1	CM031339.1	=	NC_054865.1	0
Linkage Group 2	CM031340.1	=	NC_054866.1	0
Linkage Group 3	CM031341.1	=	NC_054867.1	0
Linkage Group 4	CM031342.1	=	NC_054868.1	0
Linkage Group 5	CM031343.1	=	NC_054869.1	0
Linkage Group 6	CM031344.1	=	NC_054870.1	0
Linkage Group 7	CM031345.1	=	NC_054871.1	0
Linkage Group 8	CM031346.1	=	NC_054872.1	0
Linkage Group 9	CM031347.1	=	NC_054873.1	0
Linkage Group 10	CM031348.1	=	NC_054874.1	0
Linkage Group 11	CM031349.1	=	NC_054875.1	0
Linkage Group 12	CM031350.1	=	NC_054876.1	0
Linkage Group 13	CM031351.1	=	NC_054877.1	0
Linkage Group 14	CM031352.1	=	NC_054878.1	0
Linkage Group 15	CM031353.1	=	NC_054879.1	0
Linkage Group 16	CM031354.1	=	NC_054880.1	0
Linkage Group 17	CM031355.1	=	NC_054881.1	0
Linkage Group 18	CM031356.1	=	NC_054882.1	0
Linkage Group 19	CM031357.1	=	NC_054883.1	0
Linkage Group 20	CM031358.1	=	NC_054884.1	0
Linkage Group 21	CM031359.1	=	NC_054885.1	0
Linkage Group 22	CM031360.1	=	NC_054886.1	0
Linkage Group 23	CM031361.1	=	NC_054887.1	0
Linkage Group 24	CM031362.1	=	NC_054888.1	0
unplaced	n/a	n/a	n/a	21

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	1,173,455,521	45	1,173,427,121	51,466,935	284
Linkage Group 1	59,640,344	1	59,639,144	59,640,344	12
Linkage Group 2	57,563,660	1	57,562,460	57,563,660	12
Linkage Group 3	57,165,722	1	57,164,922	57,165,722	8
Linkage Group 4	56,752,851	1	56,751,651	56,752,851	12
Linkage Group 5	55,180,322	1	55,178,522	55,180,322	18
Linkage Group 6	54,863,525	1	54,862,625	54,863,525	9
Linkage Group 7	54,473,062	1	54,471,462	54,473,062	16
Linkage Group 8	54,455,261	1	54,454,161	54,455,261	11
Linkage Group 9	52,595,970	1	52,594,670	52,595,970	13
Linkage Group 10	51,507,803	1	51,506,903	51,507,803	9
Linkage Group 11	51,466,935	1	51,466,235	51,466,935	7
Linkage Group 12	51,411,500	1	51,410,500	51,411,500	10
Linkage Group 13	50,556,313	1	50,554,213	50,556,313	21
Linkage Group 14	49,349,154	1	49,347,054	49,349,154	21
Linkage Group 15	49,104,110	1	49,103,010	49,104,110	11
Linkage Group 16	48,124,481	1	48,122,981	48,124,481	15
Linkage Group 17	44,424,328	1	44,423,328	44,424,328	10
Linkage Group 18	44,371,524	1	44,370,724	44,371,524	8
Linkage Group 19	42,930,133	1	42,929,433	42,930,133	7
Linkage Group 20	42,235,835	1	42,234,635	42,235,835	12
Linkage Group 21	42,017,507	1	42,017,007	42,017,507	5
Linkage Group 22	37,038,322	1	37,036,422	37,038,322	19
Linkage Group 23	35,567,974	1	35,567,274	35,567,974	7
Linkage Group 24	27,249,597	1	27,248,497	27,249,597	11
unplaced	3,409,288	21	3,409,288	145,255	0

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ASM1832078v1

See Genome Information for Cheilinus undulatus

Pathogen Detection Resources

History (Show revision history)

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Assembly Unit Name
Primary Assembly
non-nuclear