U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM1061486v1

  • Anomalous assembly.
Organism name:
Stegodyphus dumicola (spiders)
Infraspecific name:
Ecotype: Namibia, Etosha
Isolate:
AA2019
BioSample:
SAMN13619660
BioProject:
PRJNA510316
Submitter:
None
Date:
2020/02/14
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_010614865.1 (replaced)
RefSeq assembly accession:
GCF_010614865.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAADJH01
Assembly method:
DBG2OLC v. Nov 16th, 2017
Expected final version:
yes
Genome coverage:
79.0x
Sequencing technology:
Illumina HiSeq; PacBio

IDs: 5832241 [UID] 16760628 [GenBank] 20185288 [RefSeq]

See Genome Information for Stegodyphus dumicola

History (Show revision history)

Comment

In May 2022 13 sequences were suppressed because they were found to be contaminants.

Global statistics

Total sequence length2,551,871,595
Total ungapped length2,551,871,244
Gaps between scaffolds0
Number of scaffolds16,531
Scaffold N50254,130
Scaffold L502,973
Number of contigs16,535
Contig N50254,130
Contig L502,973
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)16,531

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,551,871,59516,5312,551,871,244254,13040