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ASM303162v1

Organism name:
Empidonax traillii (willow flycatcher)
Infraspecific name:
Ecotype: Southwest subspecies
Isolate:
1590-97213
BioSample:
SAMN08663748
BioProject:
PRJNA437496
Submitter:
UCLA
Date:
2018/04/03
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003031625.1 (latest)
RefSeq assembly accession:
GCF_003031625.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
PWAB01
Assembly method:
Discovar de novo v. 52488; SSPACE scaffolding v. 3.0
Expected final version:
yes
Genome coverage:
124.0x
Sequencing technology:
Illumina HiSeq

IDs: 1701201 [UID] 6317738 [GenBank] 8331418 [RefSeq]

See Genome Information for Empidonax traillii

History (Show revision history)

Comment

Global statistics

Total sequence length1,123,485,537
Total ungapped length1,070,898,064
Gaps between scaffolds0
Number of scaffolds7,791
Scaffold N50895,074
Scaffold L50326
Number of contigs45,995
Contig N5086,564
Contig L503,503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)7,791

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,123,485,5377,7911,070,898,064895,07438,2040