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OKI-Apl_1.0

Organism name:
Acanthaster planci (crown-of-thorns starfish)
Sex:
male
BioSample:
SAMD00054104
BioProject:
PRJDB3175
Submitter:
Okinawa Institute of Science and Technology
Date:
2016/12/20
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001949145.1 (latest)
RefSeq assembly accession:
GCF_001949145.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
BDGF01
Assembly method:
Newbler v. 2.3
Genome coverage:
46x
Sequencing technology:
Illumina MiSeq

IDs: 950481 [UID] 3971488 [GenBank] 4908748 [RefSeq]

See Genome Information for Acanthaster planci

There are 8 assemblies for this organism

See more

History (Show revision history)

Comment

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URL:http://marinegenomics.oist.jp/genomes/gallery

Global statistics

Total sequence length383,860,178
Total ungapped length373,990,865
Gaps between scaffolds0
Number of scaffolds1,766
Scaffold N501,521,119
Scaffold L5073
Number of contigs18,089
Contig N5049,680
Contig L502,122
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)18,089

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced383,843,9441,765373,974,6311,521,11916,3230
MoleculeTotal
Length
Mitochondrion MT16,234