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Source database (GenBank or RefSeq) File type

ASM33114v1

Organism name:

Cicer arietinum (chickpea)

Infraspecific name:

Cultivar: CDC Frontier

BioSample:

SAMN02981489

BioProject:

PRJNA175619

Submitter:

BGI-Shenzhen

Date:

2013/01/16

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_000331145.1 (latest)

RefSeq assembly accession:

GCF_000331145.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome Pltd

Data displayed for RefSeq version

WGS Project:

ANPC01

Assembly method:

SOAPdenovo v. 2.03

Genome coverage:

120x

Sequencing technology:

Illumina Hiseq 2000

IDs: 525138 [UID] 525138 [GenBank] 643438 [RefSeq]

See Genome Information for Cicer arietinum

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000331145.1	≠	GCF_000331145.1	ASM33114v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	530,893,862
Total ungapped length	482,748,849
Gaps between scaffolds	418
Number of scaffolds	7,545
Scaffold N50	697,963
Scaffold L50	175
Number of contigs	39,024
Contig N50	34,102
Contig L50	4,088
Total number of chromosomes and plasmids	9
Number of component sequences (WGS or clone)	39,024

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome Ca1	CM001764.1	=	NC_021160.1	0
Chromosome Ca2	CM001765.1	=	NC_021161.1	0
Chromosome Ca3	CM001766.1	=	NC_021162.1	0
Chromosome Ca4	CM001767.1	=	NC_021163.1	0
Chromosome Ca5	CM001768.1	=	NC_021164.1	0
Chromosome Ca6	CM001769.1	=	NC_021165.1	0
Chromosome Ca7	CM001770.1	=	NC_021166.1	0
Chromosome Ca8	CM001771.1	=	NC_021167.1	0
unplaced	n/a	n/a	n/a	7,118

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	530,768,543	7,544	482,623,530	697,963	31,479	418
Chromosome Ca1	48,359,943	65	44,266,264	1,130,729	2,136	64
Chromosome Ca2	36,634,854	53	33,088,528	939,992	1,614	52
Chromosome Ca3	39,989,001	53	37,349,979	1,111,255	1,775	52
Chromosome Ca4	49,191,682	48	46,437,555	1,678,159	2,048	47
Chromosome Ca5	48,169,137	57	43,646,590	1,169,959	2,051	56
Chromosome Ca6	59,463,898	78	54,396,396	1,139,482	2,502	77
Chromosome Ca7	48,961,560	56	45,740,488	1,212,738	2,270	55
Chromosome Ca8	16,477,302	16	14,468,610	1,425,597	535	15
unplaced	183,521,166	7,118	163,229,120	224,027	16,548	0

Assembly

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ASM33114v1

See Genome Information for Cicer arietinum

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Global assembly definition

Assembly statistics

Assembly Unit Name
Primary Assembly
non-nuclear