8F9G: HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized BG18HCgl knock-in mice

PDB ID: 8F9GDownload
MMDB ID: 246880
PDB Deposition Date: 2022/11/23
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8F9G: octameric; determined by author
Molecular Components in 8F9G
Label Count Molecule
Proteins (8 molecules)
3
Bg505_md64_n332-gt5 Gp120
Molecule annotation
3
Bg505_md64_n332-gt5 Gp41
Molecule annotation
1
V3-glycan Epitope Polyclonal FAB Heavy Chain
Molecule annotation
1
V3-glycan Epitope Polyclonal FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (67 molecules)
1
59
2-acetamido-2-deoxy-beta-D-glucopyranose (Link to PubChem not yet available)2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
beta-D-mannopyranose (Link to PubChem not yet available)beta-D-mannopyranose
3
4
alpha-D-mannopyranose (Link to PubChem not yet available)alpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303