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Conserved domains on  [gi|1779421278|ref|NP_001334353|]
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alpha-2-macroglobulin isoform b [Homo sapiens]

Protein Classification

A2M and A2M_2 domain-containing protein( domain architecture ID 13392383)

protein containing domains YfaS, A2M, A2M_2, and A2M_recep

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
858-1164 5.46e-158

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


:

Pssm-ID: 239227  Cd Length: 292  Bit Score: 476.69  E-value: 5.46e-158
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  858 AMQNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERYGrnQG 937
Cdd:cd02897      1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDK--SG 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  938 NTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSAYITIALLEIPLTVT 1017
Cdd:cd02897     79 STWLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSE 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1018 HPVVRNALFCLESAWKTAqegdhgSHVYTKALLAYAFALAGnQDKRKEVLKSLNEEAVKKDNSVHWERPqkPKAPVGHFY 1097
Cdd:cd02897    159 RPVVEKALSCLEAALDSI------SDPYTLALAAYALTLAG-SEKRPEALKKLDELAISEDGTKHWSRP--PPSEEGPSY 229
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1779421278 1098 EPQAPSAEVEMTSYVLLAYLTAQPaptsEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKY 1164
Cdd:cd02897    230 YWQAPSAEVEMTAYALLALLSAGG----EDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
638-728 1.59e-41

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


:

Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 147.35  E-value: 1.59e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  638 TWIWDLVVVNSAGVAEVGVTVPDTITEWKAGAFCLSEDAGLGISSTASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNY 717
Cdd:pfam00207    1 TWLWDPVLVTDNGKASLSFTLPDSITTWRATAFALSPDTGLGVAEPPELVVFKPFFVDLNLPYSVRRGEQFELKATVFNY 80
                           90
                   ....*....|.
gi 1779421278  718 LPKCIRVSVQL 728
Cdd:pfam00207   81 LDKCLKVRVRL 91
YfaS super family cl34462
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
29-1238 1.32e-38

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


The actual alignment was detected with superfamily member COG2373:

Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 157.94  E-value: 1.32e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278   29 VFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELiPL-VYIQDPKGNRIAQwQSFQL-EGGLKQFSFPLSSEPFQGSYKVV 106
Cdd:COG2373    371 AFLFTDRGIYRPGETVHLKALLRDADGKAPAGL-PLtLELTDPDGKEVRR-QTLTLnEFGGYSFSFPLPEDAPTGTWRLE 448
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  107 VQ-KKSGGRTEHPFTVEEFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPG-HVTVSICRK------------- 171
Cdd:COG2373    449 LYvDPKPALGSKSFRVEEFKPPRFKVDLTLDKEPLKPGDPVTVTVDARYLFGAPAAGlKVEGEVTLRpartafpgypgyr 528
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  172 YSDASDCHGEDSQAFcekFSGQLNSHGCFyqQVKTKVFQLKRKEYEMKLHTEAQIQEEGtvveltGRqssEITRTITkls 251
Cdd:COG2373    529 FGDPDEEFEPEELDL---GEGTLDADGKA--SLSLPLPDAPDAPGPLRATVEASVFESG------GR---PVTRSAT--- 591
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  252 fvkvdshfrqgIPFFGQVRLVdgkGVPIPNkvifirgneanyysNATTDEHGLVQFSINTTN-----VMGTSLTVRVNYK 326
Cdd:COG2373    592 -----------VPVHPADFYV---GIRLPL--------------FDGDPEGAPATFEVVAVDpdgkpVAGKGLKVELYRE 643
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  327 DRSpcY--------GYQWVSEEHEEAHHTAYLVFSPSK----SFVHLEPMSHEL----PCGHTQTVQAHYI-------LN 383
Cdd:COG2373    644 EWR--YvwyksddgGWRYESQEKEEPVAEGTLTTGADGpaslSLTPVEWGRYRLevkdPDGGLATSVRFYAggnaswgAE 721
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  384 GGTLLGLK------------KLSFY------YLIMakggIVRTGThgLLVKQEDMK-GHFSISIPVKSDIAPVARLLIYA 444
Cdd:COG2373    722 RPDRLELSldkesykpgetaKLLIQspfagrALVT----VERDGV--LETQWVDVKgGGTTVEIPVTEDWAPNAYVSATL 795
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  445 VLPTGDVIGDSAKY-------DVENcLANKVDLSFSPSQSL-PASHAHLRVTAA-----PQSVcALRAVDQSVLlmkpda 511
Cdd:COG2373    796 VRPGDSTANDMPARaygvaplPVDP-PARRLKVELTAPEKLrPGETLTVTVKVKgaagkAAEV-TLAAVDEGIL------ 867
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  512 elsassvynllpekDLTGF--PGPLNdqdnedcinrhnvYINGITYTPVSSTnekDMYSFLEDmglkaftnskirkpkmc 589
Cdd:COG2373    868 --------------NLTGYktPDPLD-------------FFYGKRALGVETR---DLYGRLIG----------------- 900
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  590 pqlqqyEMHGPEG-LRVGfyesdvmGRGHARLVHVEEPhtetVRKYFPETWIWD-LVVVNSAGVAEVGVTVPDTITEWKA 667
Cdd:COG2373    901 ------AFGGAAGaLRSG-------GDGALGRGGNPKP----PRKRFKPVALFSgPVKTDADGKATVSFDLPDFNGTLRV 963
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  668 GAFCLSEDAgLGiSSTASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNYLPKCIRVSVQLEASPAfLAVPVEKEQAPHc 747
Cdd:COG2373    964 MAVAWSDDR-FG-SAEATVTVRKPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGG-LTLEGEATQTVT- 1039
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  748 ICANGRQTVSWAVTPKSLGNVNFTVSAEALesqelcgtevpsvpehGRKDTVIKPLLVEP-EGLEKETTFNSLlcpSGGE 826
Cdd:COG2373   1040 LAAGGRATVRFPLKAPDAGDAKVTVTATGG----------------GESDAREVELPVRPaNPLVTRATSGVL---APGE 1100
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  827 vSEELSLKLPPNVVEESARASVSV----LGDILGSAMQntqnLLQMPYGCGEQNMVLFAPNIYVLDyLNETQQLTPEIKS 902
Cdd:COG2373   1101 -SWTLPLDLPGGLRPGTGSLTLSLssspPLDLAGLLRY----LLRYPYGCTEQTTSRALPLLYLSD-LAEALGLKGDKDA 1174
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  903 KAIGYLNTGYQRQLNYKHYDGSYSTFGeryGRNQGNTWLTAFVLKTFAQARAY-IFIDEAHITQALIWLSQRQKDNGcfr 981
Cdd:COG2373   1175 ELRARIQAAIARLLSMQNSDGGFGLWP---GGSESDPWLTAYATDFLLEAREAgYAVPDDALDRALDYLRNYLRNPW--- 1248
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  982 ssgsllnnAIKGGVEDEVTLSAYITIALleipltvthpvvrnALfclesawktAQEGDHGSHVYTKALLAYAF------- 1054
Cdd:COG2373   1249 --------EIEYDDAYRLAVRAYALYVL--------------AR---------AGKADLGDLRYLYDRRKDALsplakaq 1297
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1055 -----ALAGNQDKRKEVLKSLNEEAVKKDNSVHWerpqkpkapvGHFYepqapSAEVEMTSYVLLAYLTAQPAPtsedlT 1129
Cdd:COG2373   1298 laaalALLGDKARAEELLAAALARLRETGARDYW----------YGDY-----GSPLRDQALALALLAELGPDA-----P 1357
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1130 SATNIVKWITKQQNaQGGFSSTQDTVVALHALSKYGAATFTRTGKAAQVTIqsSGTfssKFQVDNNNRLLLQQVSLPEL- 1208
Cdd:COG2373   1358 LAPKLARWLAKALK-SGRWLSTQETAWALLALAAYARAAGASPDFTATLTL--DGK---TLPLTGRGPLARVTLPAAELl 1431
                         1290      1300      1310
                   ....*....|....*....|....*....|
gi 1779421278 1209 PGEYSMKVTGEGCVYLQTSLKYNILPEKEE 1238
Cdd:COG2373   1432 AGPLTITNTGDGPLYYTLTLSGYPAEGPPP 1461
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
1274-1364 7.45e-34

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


:

Pssm-ID: 462226  Cd Length: 92  Bit Score: 125.37  E-value: 7.45e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1274 SASNMAIVDVKMVSGFIPLKPTVKMLERSNHVSRTE-VSSNHVLIYLDKVSNQTLSLFFTVLQDVPVRDLKPAIVKVYDY 1352
Cdd:pfam07677    1 ESSNMAILEVGLPSGFVPDEEDLKKLGVDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                           90
                   ....*....|..
gi 1779421278 1353 YETDEFAIAEYN 1364
Cdd:pfam07677   81 YEPERRATTFYS 92
 
Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
858-1164 5.46e-158

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


Pssm-ID: 239227  Cd Length: 292  Bit Score: 476.69  E-value: 5.46e-158
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  858 AMQNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERYGrnQG 937
Cdd:cd02897      1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDK--SG 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  938 NTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSAYITIALLEIPLTVT 1017
Cdd:cd02897     79 STWLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSE 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1018 HPVVRNALFCLESAWKTAqegdhgSHVYTKALLAYAFALAGnQDKRKEVLKSLNEEAVKKDNSVHWERPqkPKAPVGHFY 1097
Cdd:cd02897    159 RPVVEKALSCLEAALDSI------SDPYTLALAAYALTLAG-SEKRPEALKKLDELAISEDGTKHWSRP--PPSEEGPSY 229
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1779421278 1098 EPQAPSAEVEMTSYVLLAYLTAQPaptsEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKY 1164
Cdd:cd02897    230 YWQAPSAEVEMTAYALLALLSAGG----EDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
TED_complement pfam07678
A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement ...
848-1164 1.58e-153

A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement components such as C3, C4 and C5. This domain contains a short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved.


Pssm-ID: 462227 [Multi-domain]  Cd Length: 311  Bit Score: 465.62  E-value: 1.58e-153
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  848 VSVLGDILGSAMQ----NTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDG 923
Cdd:pfam07678    1 ISVVGDIMGPAIQvvpeNLSSLLRLPYGCGEQNMVLFAPNVYVLRYLDKTNQLTKLIKSKAIDYLEQGYQRQLSYKHPDG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  924 SYSTFGERygrnQGNTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSA 1003
Cdd:pfam07678   81 SYSAFGHS----PGSTWLTAFVLKVFAQARKFIFIDPEEICQSLRWLLSQQKPDGSFREPGPLLHRAMKGGVDGEVSLTA 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1004 YITIALLEI-----PLTVTHPVVRNALFCLESAwktaqEGDHGSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKD 1078
Cdd:pfam07678  157 YVTIALLEAldingLLQRVHPSIRKALTYLEQA-----QLAGLTSPYTLAILAYALALAGSPETREELLKSLDAMAREEG 231
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1079 NSVHWERPQKPKAPVGHFYEPQAPSAEVEMTSYVLLAYLtaqpapTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVAL 1158
Cdd:pfam07678  232 NSRYWERDEKSDPQGVPEYPPQAPSLEVETTAYALLAYL------LLGDLTYADPIVKWLTSQRNSHGGFSSTQDTVVAL 305

                   ....*.
gi 1779421278 1159 HALSKY 1164
Cdd:pfam07678  306 QALAEY 311
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
638-728 1.59e-41

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 147.35  E-value: 1.59e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  638 TWIWDLVVVNSAGVAEVGVTVPDTITEWKAGAFCLSEDAGLGISSTASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNY 717
Cdd:pfam00207    1 TWLWDPVLVTDNGKASLSFTLPDSITTWRATAFALSPDTGLGVAEPPELVVFKPFFVDLNLPYSVRRGEQFELKATVFNY 80
                           90
                   ....*....|.
gi 1779421278  718 LPKCIRVSVQL 728
Cdd:pfam00207   81 LDKCLKVRVRL 91
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
29-1238 1.32e-38

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 157.94  E-value: 1.32e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278   29 VFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELiPL-VYIQDPKGNRIAQwQSFQL-EGGLKQFSFPLSSEPFQGSYKVV 106
Cdd:COG2373    371 AFLFTDRGIYRPGETVHLKALLRDADGKAPAGL-PLtLELTDPDGKEVRR-QTLTLnEFGGYSFSFPLPEDAPTGTWRLE 448
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  107 VQ-KKSGGRTEHPFTVEEFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPG-HVTVSICRK------------- 171
Cdd:COG2373    449 LYvDPKPALGSKSFRVEEFKPPRFKVDLTLDKEPLKPGDPVTVTVDARYLFGAPAAGlKVEGEVTLRpartafpgypgyr 528
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  172 YSDASDCHGEDSQAFcekFSGQLNSHGCFyqQVKTKVFQLKRKEYEMKLHTEAQIQEEGtvveltGRqssEITRTITkls 251
Cdd:COG2373    529 FGDPDEEFEPEELDL---GEGTLDADGKA--SLSLPLPDAPDAPGPLRATVEASVFESG------GR---PVTRSAT--- 591
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  252 fvkvdshfrqgIPFFGQVRLVdgkGVPIPNkvifirgneanyysNATTDEHGLVQFSINTTN-----VMGTSLTVRVNYK 326
Cdd:COG2373    592 -----------VPVHPADFYV---GIRLPL--------------FDGDPEGAPATFEVVAVDpdgkpVAGKGLKVELYRE 643
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  327 DRSpcY--------GYQWVSEEHEEAHHTAYLVFSPSK----SFVHLEPMSHEL----PCGHTQTVQAHYI-------LN 383
Cdd:COG2373    644 EWR--YvwyksddgGWRYESQEKEEPVAEGTLTTGADGpaslSLTPVEWGRYRLevkdPDGGLATSVRFYAggnaswgAE 721
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  384 GGTLLGLK------------KLSFY------YLIMakggIVRTGThgLLVKQEDMK-GHFSISIPVKSDIAPVARLLIYA 444
Cdd:COG2373    722 RPDRLELSldkesykpgetaKLLIQspfagrALVT----VERDGV--LETQWVDVKgGGTTVEIPVTEDWAPNAYVSATL 795
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  445 VLPTGDVIGDSAKY-------DVENcLANKVDLSFSPSQSL-PASHAHLRVTAA-----PQSVcALRAVDQSVLlmkpda 511
Cdd:COG2373    796 VRPGDSTANDMPARaygvaplPVDP-PARRLKVELTAPEKLrPGETLTVTVKVKgaagkAAEV-TLAAVDEGIL------ 867
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  512 elsassvynllpekDLTGF--PGPLNdqdnedcinrhnvYINGITYTPVSSTnekDMYSFLEDmglkaftnskirkpkmc 589
Cdd:COG2373    868 --------------NLTGYktPDPLD-------------FFYGKRALGVETR---DLYGRLIG----------------- 900
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  590 pqlqqyEMHGPEG-LRVGfyesdvmGRGHARLVHVEEPhtetVRKYFPETWIWD-LVVVNSAGVAEVGVTVPDTITEWKA 667
Cdd:COG2373    901 ------AFGGAAGaLRSG-------GDGALGRGGNPKP----PRKRFKPVALFSgPVKTDADGKATVSFDLPDFNGTLRV 963
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  668 GAFCLSEDAgLGiSSTASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNYLPKCIRVSVQLEASPAfLAVPVEKEQAPHc 747
Cdd:COG2373    964 MAVAWSDDR-FG-SAEATVTVRKPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGG-LTLEGEATQTVT- 1039
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  748 ICANGRQTVSWAVTPKSLGNVNFTVSAEALesqelcgtevpsvpehGRKDTVIKPLLVEP-EGLEKETTFNSLlcpSGGE 826
Cdd:COG2373   1040 LAAGGRATVRFPLKAPDAGDAKVTVTATGG----------------GESDAREVELPVRPaNPLVTRATSGVL---APGE 1100
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  827 vSEELSLKLPPNVVEESARASVSV----LGDILGSAMQntqnLLQMPYGCGEQNMVLFAPNIYVLDyLNETQQLTPEIKS 902
Cdd:COG2373   1101 -SWTLPLDLPGGLRPGTGSLTLSLssspPLDLAGLLRY----LLRYPYGCTEQTTSRALPLLYLSD-LAEALGLKGDKDA 1174
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  903 KAIGYLNTGYQRQLNYKHYDGSYSTFGeryGRNQGNTWLTAFVLKTFAQARAY-IFIDEAHITQALIWLSQRQKDNGcfr 981
Cdd:COG2373   1175 ELRARIQAAIARLLSMQNSDGGFGLWP---GGSESDPWLTAYATDFLLEAREAgYAVPDDALDRALDYLRNYLRNPW--- 1248
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  982 ssgsllnnAIKGGVEDEVTLSAYITIALleipltvthpvvrnALfclesawktAQEGDHGSHVYTKALLAYAF------- 1054
Cdd:COG2373   1249 --------EIEYDDAYRLAVRAYALYVL--------------AR---------AGKADLGDLRYLYDRRKDALsplakaq 1297
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1055 -----ALAGNQDKRKEVLKSLNEEAVKKDNSVHWerpqkpkapvGHFYepqapSAEVEMTSYVLLAYLTAQPAPtsedlT 1129
Cdd:COG2373   1298 laaalALLGDKARAEELLAAALARLRETGARDYW----------YGDY-----GSPLRDQALALALLAELGPDA-----P 1357
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1130 SATNIVKWITKQQNaQGGFSSTQDTVVALHALSKYGAATFTRTGKAAQVTIqsSGTfssKFQVDNNNRLLLQQVSLPEL- 1208
Cdd:COG2373   1358 LAPKLARWLAKALK-SGRWLSTQETAWALLALAAYARAAGASPDFTATLTL--DGK---TLPLTGRGPLARVTLPAAELl 1431
                         1290      1300      1310
                   ....*....|....*....|....*....|
gi 1779421278 1209 PGEYSMKVTGEGCVYLQTSLKYNILPEKEE 1238
Cdd:COG2373   1432 AGPLTITNTGDGPLYYTLTLSGYPAEGPPP 1461
MG4 pfam17789
Macroglobulin domain MG4; This domain is MG4 found in complement C3 and C5 proteins.
250-345 2.15e-35

Macroglobulin domain MG4; This domain is MG4 found in complement C3 and C5 proteins.


Pssm-ID: 465507  Cd Length: 95  Bit Score: 130.06  E-value: 2.15e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  250 LSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPNKVIFIRGNEANYYSNATTDEHGLVQFSINTTNvMGTSLTVRVNYKDRS 329
Cdd:pfam17789    1 ITFEKTPKYFKPGLPFSGQVLVVDPDGSPAPNVPVFIEAGNTEFNQNLTTDEDGTAQFSINTPG-NAASLSITVKTKDPD 79
                           90
                   ....*....|....*.
gi 1779421278  330 PCYGYQWVSEEHEEAH 345
Cdd:pfam17789   80 LCPEHQALAEMYAEAY 95
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
1274-1364 7.45e-34

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


Pssm-ID: 462226  Cd Length: 92  Bit Score: 125.37  E-value: 7.45e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1274 SASNMAIVDVKMVSGFIPLKPTVKMLERSNHVSRTE-VSSNHVLIYLDKVSNQTLSLFFTVLQDVPVRDLKPAIVKVYDY 1352
Cdd:pfam07677    1 ESSNMAILEVGLPSGFVPDEEDLKKLGVDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                           90
                   ....*....|..
gi 1779421278 1353 YETDEFAIAEYN 1364
Cdd:pfam07677   81 YEPERRATTFYS 92
 
Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
858-1164 5.46e-158

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


Pssm-ID: 239227  Cd Length: 292  Bit Score: 476.69  E-value: 5.46e-158
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  858 AMQNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERYGrnQG 937
Cdd:cd02897      1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDK--SG 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  938 NTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSAYITIALLEIPLTVT 1017
Cdd:cd02897     79 STWLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSE 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1018 HPVVRNALFCLESAWKTAqegdhgSHVYTKALLAYAFALAGnQDKRKEVLKSLNEEAVKKDNSVHWERPqkPKAPVGHFY 1097
Cdd:cd02897    159 RPVVEKALSCLEAALDSI------SDPYTLALAAYALTLAG-SEKRPEALKKLDELAISEDGTKHWSRP--PPSEEGPSY 229
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1779421278 1098 EPQAPSAEVEMTSYVLLAYLTAQPaptsEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKY 1164
Cdd:cd02897    230 YWQAPSAEVEMTAYALLALLSAGG----EDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
TED_complement pfam07678
A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement ...
848-1164 1.58e-153

A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement components such as C3, C4 and C5. This domain contains a short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved.


Pssm-ID: 462227 [Multi-domain]  Cd Length: 311  Bit Score: 465.62  E-value: 1.58e-153
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  848 VSVLGDILGSAMQ----NTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDG 923
Cdd:pfam07678    1 ISVVGDIMGPAIQvvpeNLSSLLRLPYGCGEQNMVLFAPNVYVLRYLDKTNQLTKLIKSKAIDYLEQGYQRQLSYKHPDG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  924 SYSTFGERygrnQGNTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSA 1003
Cdd:pfam07678   81 SYSAFGHS----PGSTWLTAFVLKVFAQARKFIFIDPEEICQSLRWLLSQQKPDGSFREPGPLLHRAMKGGVDGEVSLTA 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1004 YITIALLEI-----PLTVTHPVVRNALFCLESAwktaqEGDHGSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKD 1078
Cdd:pfam07678  157 YVTIALLEAldingLLQRVHPSIRKALTYLEQA-----QLAGLTSPYTLAILAYALALAGSPETREELLKSLDAMAREEG 231
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1079 NSVHWERPQKPKAPVGHFYEPQAPSAEVEMTSYVLLAYLtaqpapTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVAL 1158
Cdd:pfam07678  232 NSRYWERDEKSDPQGVPEYPPQAPSLEVETTAYALLAYL------LLGDLTYADPIVKWLTSQRNSHGGFSSTQDTVVAL 305

                   ....*.
gi 1779421278 1159 HALSKY 1164
Cdd:pfam07678  306 QALAEY 311
A2M_like cd02891
Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier ...
858-1164 3.24e-107

Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier protein in serum. It is a broadly specific proteinase inhibitor. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. This group contains another broadly specific proteinase inhibitor: pregnancy zone protein (PZP). PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system. This group also contains C3, C4 and C5 of vertebrate complement. The vertebrate complement is an effector of both the acquired and innate immune systems The point of convergence of the classical, alternative and lectin pathways of the complement system is the proteolytic activation of C3. C4 plays a key role in propagating the classical and lectin pathways. C5 participates in the classical and alternative pathways. The thioester bond located within the structure of C3 and C4 is central to the function of complement. C5 does not contain an active thioester bond.


Pssm-ID: 239221 [Multi-domain]  Cd Length: 282  Bit Score: 340.52  E-value: 3.24e-107
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  858 AMQNTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGeryGRNQG 937
Cdd:cd02891      1 SLGNLDYLLRYPYGCGEQTMSRAAPNLYVLKYLDATGQLTPEIREKALEYIRKGYQRLLTYQRSDGSFSAWG---NSDSG 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  938 NTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSAYITIALLEIPLTVt 1017
Cdd:cd02891     78 STWLTAYVVKFLSQARKYIDVDENVLARALGWLVPQQKEDGSFRELGPVIHREMKGGVDDSVSLTAYVLIALAEAGKAC- 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1018 HPVVRNALFCLESAWktaqegDHGSHVYTKALLAYAFALAGNQDKRKEVLKSLNEEAVKKDNSVHWERpqkpkapvgHFY 1097
Cdd:cd02891    157 DASIEKALAYLETQL------DGLLDPYALAILAYALALAGDSTRADEALKKLLEAAREKGGTAHWSL---------SWP 221
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1779421278 1098 EPQAPSAEVEMTSYVLLAYLTAqpaptsEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKY 1164
Cdd:cd02891    222 GDYGSSLRVEATAYALLALLKL------GDLEEAGPIAKWLAQQRNSGGGFLSTQDTVVALQALAAY 282
complement_C3_C4_C5 cd02896
Proteins similar to C3, C4 and C5 of vertebrate complement. The vertebrate complement system, ...
861-1164 4.15e-71

Proteins similar to C3, C4 and C5 of vertebrate complement. The vertebrate complement system, comprised of a large number of distinct plasma proteins, is an effector of both the acquired and innate immune systems. The point of convergence of the classical, alternative and lectin pathways of the complement system is the proteolytic activation of C3. C4 plays a key role in propagating the classical and lectin pathways. C5 participates in the classical and alternative pathways. The thioester bond located within the structure of C3 and C4 is central to the function of complement. C5 does not contain an active thioester bond.


Pssm-ID: 239226 [Multi-domain]  Cd Length: 297  Bit Score: 240.25  E-value: 4.15e-71
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  861 NTQNLLQMPYGCGEQNMVLFAPNIYVLDYLNETQQ---LTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERygrnQG 937
Cdd:cd02896      4 GLEKLIRLPTGCGEQTMIKLAPTVYALRYLDTTNQwekLGPERRDEALKYIRQGYQRQLSYRKPDGSYAAWKNR----PS 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  938 NTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGV---EDEVTLSAYITIALLEIpL 1014
Cdd:cd02896     80 STWLTAFVVKVFSLARKYIPVDQNVICGSVNWLISNQKPDGSFQEPSPVIHREMTGGVegsEGDVSLTAFVLIALQEA-R 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1015 TVTHPVVRNalfcLESAWKTAQE-----GDHGSHVYTKALLAYAFALAgNQDKRKEVLKSLNEEAVKKDNSVHWERPQKP 1089
Cdd:cd02896    159 SICPPEVQN----LDQSIRKAISylenqLPNLQRPYALAITAYALALA-DSPLSHAANRKLLSLAKRDGNGWYWWTIDSP 233
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1779421278 1090 kapvgHFYEPQAPSAEVEMTSYVLLAYLtaqpapTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKY 1164
Cdd:cd02896    234 -----YWPVPGPSAITVETTAYALLALL------KLGDIEYANPIARWLTEQRNYGGGFGSTQDTVVALQALAEY 297
ISOPREN_C2_like cd00688
This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two ...
858-1164 6.64e-61

This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.


Pssm-ID: 238362 [Multi-domain]  Cd Length: 300  Bit Score: 210.87  E-value: 6.64e-61
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  858 AMQNTQNLLQMPYG--------CGEQNMVLFAPNIYVLDYLNETqqltpEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFG 929
Cdd:cd00688      1 IEKHLKYLLRYPYGdghwyqslCGEQTWSTAWPLLALLLLLAAT-----GIRDKADENIEKGIQRLLSYQLSDGGFSGWG 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  930 eryGRNQGNTWLTAFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNaiKGGVEDEVTLSAYITIAL 1009
Cdd:cd00688     76 ---GNDYPSLWLTAYALKALLLAGDYIAVDRIDLARALNWLLSLQNEDGGFREDGPGNHR--IGGDESDVRLTAYALIAL 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1010 LEIPLTVTHPVVRNALFCLESawktAQEGDHG------SHVYTKALLAYAFALAG--NQDKRKEVLKSLNEEAVKKDNSV 1081
Cdd:cd00688    151 ALLGKLDPDPLIEKALDYLLS----CQNYDGGfgpggeSHGYGTACAAAALALLGdlDSPDAKKALRWLLSRQRPDGGWG 226
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1082 HWERPqkpkapvghfYEPQAPSAEVEMTSYVLLAYLTAqpaptsEDLTSATNIVKWITKQQNAQGGFSS-------TQDT 1154
Cdd:cd00688    227 EGRDR----------TNKLSDSCYTEWAAYALLALGKL------GDLEDAEKLVKWLLSQQNEDGGFSSkpgksydTQHT 290
                          330
                   ....*....|
gi 1779421278 1155 VVALHALSKY 1164
Cdd:cd00688    291 VFALLALSLY 300
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
638-728 1.59e-41

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 147.35  E-value: 1.59e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  638 TWIWDLVVVNSAGVAEVGVTVPDTITEWKAGAFCLSEDAGLGISSTASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNY 717
Cdd:pfam00207    1 TWLWDPVLVTDNGKASLSFTLPDSITTWRATAFALSPDTGLGVAEPPELVVFKPFFVDLNLPYSVRRGEQFELKATVFNY 80
                           90
                   ....*....|.
gi 1779421278  718 LPKCIRVSVQL 728
Cdd:pfam00207   81 LDKCLKVRVRL 91
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
29-1238 1.32e-38

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 157.94  E-value: 1.32e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278   29 VFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELiPL-VYIQDPKGNRIAQwQSFQL-EGGLKQFSFPLSSEPFQGSYKVV 106
Cdd:COG2373    371 AFLFTDRGIYRPGETVHLKALLRDADGKAPAGL-PLtLELTDPDGKEVRR-QTLTLnEFGGYSFSFPLPEDAPTGTWRLE 448
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  107 VQ-KKSGGRTEHPFTVEEFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPG-HVTVSICRK------------- 171
Cdd:COG2373    449 LYvDPKPALGSKSFRVEEFKPPRFKVDLTLDKEPLKPGDPVTVTVDARYLFGAPAAGlKVEGEVTLRpartafpgypgyr 528
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  172 YSDASDCHGEDSQAFcekFSGQLNSHGCFyqQVKTKVFQLKRKEYEMKLHTEAQIQEEGtvveltGRqssEITRTITkls 251
Cdd:COG2373    529 FGDPDEEFEPEELDL---GEGTLDADGKA--SLSLPLPDAPDAPGPLRATVEASVFESG------GR---PVTRSAT--- 591
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  252 fvkvdshfrqgIPFFGQVRLVdgkGVPIPNkvifirgneanyysNATTDEHGLVQFSINTTN-----VMGTSLTVRVNYK 326
Cdd:COG2373    592 -----------VPVHPADFYV---GIRLPL--------------FDGDPEGAPATFEVVAVDpdgkpVAGKGLKVELYRE 643
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  327 DRSpcY--------GYQWVSEEHEEAHHTAYLVFSPSK----SFVHLEPMSHEL----PCGHTQTVQAHYI-------LN 383
Cdd:COG2373    644 EWR--YvwyksddgGWRYESQEKEEPVAEGTLTTGADGpaslSLTPVEWGRYRLevkdPDGGLATSVRFYAggnaswgAE 721
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  384 GGTLLGLK------------KLSFY------YLIMakggIVRTGThgLLVKQEDMK-GHFSISIPVKSDIAPVARLLIYA 444
Cdd:COG2373    722 RPDRLELSldkesykpgetaKLLIQspfagrALVT----VERDGV--LETQWVDVKgGGTTVEIPVTEDWAPNAYVSATL 795
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  445 VLPTGDVIGDSAKY-------DVENcLANKVDLSFSPSQSL-PASHAHLRVTAA-----PQSVcALRAVDQSVLlmkpda 511
Cdd:COG2373    796 VRPGDSTANDMPARaygvaplPVDP-PARRLKVELTAPEKLrPGETLTVTVKVKgaagkAAEV-TLAAVDEGIL------ 867
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  512 elsassvynllpekDLTGF--PGPLNdqdnedcinrhnvYINGITYTPVSSTnekDMYSFLEDmglkaftnskirkpkmc 589
Cdd:COG2373    868 --------------NLTGYktPDPLD-------------FFYGKRALGVETR---DLYGRLIG----------------- 900
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  590 pqlqqyEMHGPEG-LRVGfyesdvmGRGHARLVHVEEPhtetVRKYFPETWIWD-LVVVNSAGVAEVGVTVPDTITEWKA 667
Cdd:COG2373    901 ------AFGGAAGaLRSG-------GDGALGRGGNPKP----PRKRFKPVALFSgPVKTDADGKATVSFDLPDFNGTLRV 963
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  668 GAFCLSEDAgLGiSSTASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNYLPKCIRVSVQLEASPAfLAVPVEKEQAPHc 747
Cdd:COG2373    964 MAVAWSDDR-FG-SAEATVTVRKPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGG-LTLEGEATQTVT- 1039
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  748 ICANGRQTVSWAVTPKSLGNVNFTVSAEALesqelcgtevpsvpehGRKDTVIKPLLVEP-EGLEKETTFNSLlcpSGGE 826
Cdd:COG2373   1040 LAAGGRATVRFPLKAPDAGDAKVTVTATGG----------------GESDAREVELPVRPaNPLVTRATSGVL---APGE 1100
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  827 vSEELSLKLPPNVVEESARASVSV----LGDILGSAMQntqnLLQMPYGCGEQNMVLFAPNIYVLDyLNETQQLTPEIKS 902
Cdd:COG2373   1101 -SWTLPLDLPGGLRPGTGSLTLSLssspPLDLAGLLRY----LLRYPYGCTEQTTSRALPLLYLSD-LAEALGLKGDKDA 1174
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  903 KAIGYLNTGYQRQLNYKHYDGSYSTFGeryGRNQGNTWLTAFVLKTFAQARAY-IFIDEAHITQALIWLSQRQKDNGcfr 981
Cdd:COG2373   1175 ELRARIQAAIARLLSMQNSDGGFGLWP---GGSESDPWLTAYATDFLLEAREAgYAVPDDALDRALDYLRNYLRNPW--- 1248
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  982 ssgsllnnAIKGGVEDEVTLSAYITIALleipltvthpvvrnALfclesawktAQEGDHGSHVYTKALLAYAF------- 1054
Cdd:COG2373   1249 --------EIEYDDAYRLAVRAYALYVL--------------AR---------AGKADLGDLRYLYDRRKDALsplakaq 1297
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1055 -----ALAGNQDKRKEVLKSLNEEAVKKDNSVHWerpqkpkapvGHFYepqapSAEVEMTSYVLLAYLTAQPAPtsedlT 1129
Cdd:COG2373   1298 laaalALLGDKARAEELLAAALARLRETGARDYW----------YGDY-----GSPLRDQALALALLAELGPDA-----P 1357
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1130 SATNIVKWITKQQNaQGGFSSTQDTVVALHALSKYGAATFTRTGKAAQVTIqsSGTfssKFQVDNNNRLLLQQVSLPEL- 1208
Cdd:COG2373   1358 LAPKLARWLAKALK-SGRWLSTQETAWALLALAAYARAAGASPDFTATLTL--DGK---TLPLTGRGPLARVTLPAAELl 1431
                         1290      1300      1310
                   ....*....|....*....|....*....|
gi 1779421278 1209 PGEYSMKVTGEGCVYLQTSLKYNILPEKEE 1238
Cdd:COG2373   1432 AGPLTITNTGDGPLYYTLTLSGYPAEGPPP 1461
MG4 pfam17789
Macroglobulin domain MG4; This domain is MG4 found in complement C3 and C5 proteins.
250-345 2.15e-35

Macroglobulin domain MG4; This domain is MG4 found in complement C3 and C5 proteins.


Pssm-ID: 465507  Cd Length: 95  Bit Score: 130.06  E-value: 2.15e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  250 LSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPNKVIFIRGNEANYYSNATTDEHGLVQFSINTTNvMGTSLTVRVNYKDRS 329
Cdd:pfam17789    1 ITFEKTPKYFKPGLPFSGQVLVVDPDGSPAPNVPVFIEAGNTEFNQNLTTDEDGTAQFSINTPG-NAASLSITVKTKDPD 79
                           90
                   ....*....|....*.
gi 1779421278  330 PCYGYQWVSEEHEEAH 345
Cdd:pfam17789   80 LCPEHQALAEMYAEAY 95
A2M_BRD pfam07703
Alpha-2-macroglobulin bait region domain; Alpha-2-macroglobulins (A2Ms) are plasma proteins ...
359-507 6.48e-34

Alpha-2-macroglobulin bait region domain; Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and species that colonize higher eukaryotes. This domain is found in eukaryotic and bacterial proteins. In human A2Ms, this domain encompasses macroglobulin-like domain MG5 and 6 including bait region. In Salmonella enterica ser A2Ms, this domain encompasses MG7 and MG8 including the bait region. The Bait region is cleaved by proteases, followed by a large conformational change that blocks the target protease within a cage-like complex. This model of protease entrapment is recognized as the Venus flytrap mechanism.


Pssm-ID: 462235 [Multi-domain]  Cd Length: 139  Bit Score: 127.47  E-value: 6.48e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  359 VHLEPMSHELPCGHTQTVQAHYILNGGTLLGlkklSFYYLIMAKGGIVRTGTHGllvkqedmkGHFSISIPVKSDIAPVA 438
Cdd:pfam07703    1 LHLSTDKTEYKPGETATVTVKSPFDGTVERD----GFTYLVLSKGQIVVVGRGG---------VTTSFSLPVTAEMAPSA 67
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1779421278  439 RLLIYAV---LPTGDVIGDSAKYDVENCLANKVDLSFSPSQSLPASHAHLRVTAAPQSVCALRAVDQSVLLM 507
Cdd:pfam07703   68 RVVAYYVrvdLSKPEVVADSVWVDVDDTCENKLKVTLSAEKYRPGSTVELKVKADPGAYVALAAVDKGVLLL 139
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
1274-1364 7.45e-34

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


Pssm-ID: 462226  Cd Length: 92  Bit Score: 125.37  E-value: 7.45e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278 1274 SASNMAIVDVKMVSGFIPLKPTVKMLERSNHVSRTE-VSSNHVLIYLDKVSNQTLSLFFTVLQDVPVRDLKPAIVKVYDY 1352
Cdd:pfam07677    1 ESSNMAILEVGLPSGFVPDEEDLKKLGVDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                           90
                   ....*....|..
gi 1779421278 1353 YETDEFAIAEYN 1364
Cdd:pfam07677   81 YEPERRATTFYS 92
MG3 pfam17791
Macroglobulin domain MG3; This entry corresponds to the MG3 domain found in complement ...
123-213 8.12e-31

Macroglobulin domain MG3; This entry corresponds to the MG3 domain found in complement components C3, C4 and C5.


Pssm-ID: 465509  Cd Length: 83  Bit Score: 116.60  E-value: 8.12e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278  123 EFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRKYSDASDCHgedsqafcEKFSGQLNSHGCFYQ 202
Cdd:pfam17791    1 EYVLPKFEVKVEVPKFISVKDEEFQVTICAKYTYGKPVKGKAYVTLCLKDDSKRKCF--------ESFSKELDKDGCGSA 72
                           90
                   ....*....|.
gi 1779421278  203 QVKTKVFQLKR 213
Cdd:pfam17791   73 SLSTEEFQLTF 83
MG2 pfam01835
MG2 domain; This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin in eukaryotes. ...
29-121 2.51e-25

MG2 domain; This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin in eukaryotes. Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and species that colonize higher eukaryotes. This domain is found in eukaryotic and bacterial proteins. In human A2Ms, this domain is termed macroglobulin-like (MG) domain 2 and in Salmonella enterica ser A2Ms, this is domain 4.


Pssm-ID: 426464 [Multi-domain]  Cd Length: 95  Bit Score: 101.24  E-value: 2.51e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1779421278   29 VFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQ 108
Cdd:pfam01835    2 AFVYTDRGIYRPGETVHFKGLLRDQDLRPLAGLPVTLTVTDPDGNEVRRLPLTTDEFGGFSGSFPLPETAPTGTYTVVLR 81
                           90
                   ....*....|....
gi 1779421278  109 K-KSGGRTEHPFTV 121
Cdd:pfam01835   82 DgAGGSLGSGSFRV 95
Big_1 pfam02369
Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like ...
268-323 2.19e-03

Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.


Pssm-ID: 460541 [Multi-domain]  Cd Length: 64  Bit Score: 37.92  E-value: 2.19e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1779421278  268 QVRLVDGKGVPIPNK-VIFIRGNEANYYSNATTDEHGLVQFSInTTNVMGTSlTVRV 323
Cdd:pfam02369   10 TATVTDANGNPVPGAtVTFSASGGTLSASSGTTDANGQATVTL-TSTKAGTV-TVTA 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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