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Report for CCDS5497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5497.1 Public Homo sapiens 7 H2AZ2 24 110 108 CCDS HistoryNCBI Gene:94239Re-query CCDS DB by CCDS ID:5497.1Re-query CCDS DB by GeneID:94239See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000350771.7 ENSP00000340708.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000350771.7Link to Ensembl Protein Viewer:ENSP00000340708.3Re-query CCDS DB by Nucleotide ID:ENST00000350771Re-query CCDS DB by Protein ID:ENSP00000340708
Original member Current member NCBI NM_201436.3 NP_958844.1 Accepted alive Link to Nucleotide Sequence:NM_201436.3Link to Protein Sequence:NP_958844.1Re-query CCDS DB by Nucleotide ID:NM_201436Re-query CCDS DB by Protein ID:NP_958844Link to BLAST:NP_958844.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958844.1 102 Q71UI9-4 102 100% 0 0

Chromosomal Locations for CCDS 5497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44834501 44834562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44835529 44835658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44840899 44841012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44847969 44847971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGTTTCCTGTGGGCCGCATCCACAGACACTTGAAGACTCGCACCACAAGCCATGGAAGGGTGGGTGCCA
CTGCTGCCGTGTACAGTGCTGCGATTCTGGAGTACCTCACTGCAGAGGTGCTGGAGCTGGCAGGTAATGC
TTCTAAGGATCTCAAAGTAAAGCGTATCACTCCGCGTCACTTGCAGCTTGCAATCCGTGGTGATGAAGAG
TTGGATTCTCTTATCAAGGCTACCATAGCTGGGGGTGGTGTGATCCCTCACATCCACAAATCTCTGATTG
GAAAGAAGGGACAGCAGAAAACTGCTTAG

Translation (102 aa):
MFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEE
LDSLIKATIAGGGVIPHIHKSLIGKKGQQKTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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