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Report for CCDS4719.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
4719.1 |
Public |
Homo sapiens |
6 |
CLIC1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:1192](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:4719.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:1192](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 6 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 4719.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000375779.6 |
ENSP00000364934.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000375779.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000364934.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000375779](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000364934](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000375780.6 |
ENSP00000364935.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000375780.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000364935.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000375780](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000364935](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000375784.8 |
ENSP00000364940.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000375784.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000364940.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000375784](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000364940](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000395892.5 |
ENSP00000379229.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000395892.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000379229.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000395892](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000379229](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000616760.1 |
ENSP00000479808.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000616760.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000479808.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000616760](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000479808](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001287593.1 |
NP_001274522.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001287593.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001274522.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001287593](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001274522](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001274522.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001287594.3 |
NP_001274523.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001287594.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001274523.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001287594](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001274523](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001274523.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001288.6 |
NP_001279.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001288.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001279.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001288](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001279](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001279.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 4719.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (726 nt): ATGGCTGAAGAACAACCGCAGGTCGAATTGTTCGTGAAGGCTGGCAGTGATGGGGCCAAGATTGGGAACT GCCCATTCTCCCAGAGACTGTTCATGGTACTGTGGCTCAAGGGAGTCACCTTCAATGTTACCACCGTTGA CACCAAAAGGCGGACCGAGACAGTGCAGAAGCTGTGCCCAGGGGGGCAGCTCCCATTCCTGCTGTATGGC ACTGAAGTGCACACAGACACCAACAAGATTGAGGAATTTCTGGAGGCAGTGCTGTGCCCTCCCAGGTACC CCAAGCTGGCAGCTCTGAACCCTGAGTCCAACACAGCTGGGCTGGACATATTTGCCAAATTTTCTGCCTA CATCAAGAATTCAAACCCAGCACTCAATGACAATCTGGAGAAGGGACTCCTGAAAGCCCTGAAGGTTTTA GACAATTACTTAACATCCCCCCTCCCAGAAGAAGTGGATGAAACCAGTGCTGAAGATGAAGGTGTCTCTC AGAGGAAGTTTTTGGATGGCAACGAGCTCACCCTGGCTGACTGCAACCTGTTGCCAAAGTTACACATAGT ACAGGTGGTGTGTAAGAAGTACCGGGGATTCACCATCCCCGAGGCCTTCCGGGGAGTGCATCGGTACTTG AGCAATGCCTACGCCCGGGAAGAATTCGCTTCCACCTGTCCAGATGATGAGGAGATCGAGCTCGCCTATG AGCAAGTGGCAAAGGCCCTCAAATAA
Translation (241 aa): MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYG TEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVL DNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYL SNAYAREEFASTCPDDEEIELAYEQVAKALK
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