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Report for CCDS5397.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5397.1 Public Homo sapiens 7 HNRNPA2B1 24 110 108 CCDS HistoryNCBI Gene:3181Re-query CCDS DB by CCDS ID:5397.1Re-query CCDS DB by GeneID:3181See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5397.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618183.5 ENSP00000478691.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000618183.5Link to Ensembl Protein Viewer:ENSP00000478691.2Re-query CCDS DB by Nucleotide ID:ENST00000618183Re-query CCDS DB by Protein ID:ENSP00000478691
Original member Current member EBI ENST00000608362.2 ENSP00000497298.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000608362.2Link to Ensembl Protein Viewer:ENSP00000497298.1Re-query CCDS DB by Nucleotide ID:ENST00000608362Re-query CCDS DB by Protein ID:ENSP00000497298
Original member Current member EBI ENST00000677574.1 ENSP00000503021.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677574.1Link to Ensembl Protein Viewer:ENSP00000503021.1Re-query CCDS DB by Nucleotide ID:ENST00000677574Re-query CCDS DB by Protein ID:ENSP00000503021
Original member Current member EBI ENST00000678697.1 ENSP00000503047.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678697.1Link to Ensembl Protein Viewer:ENSP00000503047.1Re-query CCDS DB by Nucleotide ID:ENST00000678697Re-query CCDS DB by Protein ID:ENSP00000503047
Original member Current member EBI ENST00000677656.1 ENSP00000503060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677656.1Link to Ensembl Protein Viewer:ENSP00000503060.1Re-query CCDS DB by Nucleotide ID:ENST00000677656Re-query CCDS DB by Protein ID:ENSP00000503060
Original member Current member EBI ENST00000677339.1 ENSP00000503242.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677339.1Link to Ensembl Protein Viewer:ENSP00000503242.1Re-query CCDS DB by Nucleotide ID:ENST00000677339Re-query CCDS DB by Protein ID:ENSP00000503242
Original member Current member EBI ENST00000678449.1 ENSP00000503375.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678449.1Link to Ensembl Protein Viewer:ENSP00000503375.1Re-query CCDS DB by Nucleotide ID:ENST00000678449Re-query CCDS DB by Protein ID:ENSP00000503375
Original member Current member EBI ENST00000678779.1 ENSP00000503429.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678779.1Link to Ensembl Protein Viewer:ENSP00000503429.1Re-query CCDS DB by Nucleotide ID:ENST00000678779Re-query CCDS DB by Protein ID:ENSP00000503429
Original member Current member EBI ENST00000677631.1 ENSP00000503452.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677631.1Link to Ensembl Protein Viewer:ENSP00000503452.1Re-query CCDS DB by Nucleotide ID:ENST00000677631Re-query CCDS DB by Protein ID:ENSP00000503452
Original member Current member EBI ENST00000678998.1 ENSP00000503460.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678998.1Link to Ensembl Protein Viewer:ENSP00000503460.1Re-query CCDS DB by Nucleotide ID:ENST00000678998Re-query CCDS DB by Protein ID:ENSP00000503460
Original member Current member EBI ENST00000678884.1 ENSP00000503501.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678884.1Link to Ensembl Protein Viewer:ENSP00000503501.1Re-query CCDS DB by Nucleotide ID:ENST00000678884Re-query CCDS DB by Protein ID:ENSP00000503501
Original member Current member EBI ENST00000677396.1 ENSP00000503703.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677396.1Link to Ensembl Protein Viewer:ENSP00000503703.1Re-query CCDS DB by Nucleotide ID:ENST00000677396Re-query CCDS DB by Protein ID:ENSP00000503703
Original member Current member EBI ENST00000678431.1 ENSP00000503833.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678431.1Link to Ensembl Protein Viewer:ENSP00000503833.1Re-query CCDS DB by Nucleotide ID:ENST00000678431Re-query CCDS DB by Protein ID:ENSP00000503833
Original member Current member EBI ENST00000676497.1 ENSP00000503836.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676497.1Link to Ensembl Protein Viewer:ENSP00000503836.1Re-query CCDS DB by Nucleotide ID:ENST00000676497Re-query CCDS DB by Protein ID:ENSP00000503836
Original member Current member EBI ENST00000677906.1 ENSP00000503870.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677906.1Link to Ensembl Protein Viewer:ENSP00000503870.1Re-query CCDS DB by Nucleotide ID:ENST00000677906Re-query CCDS DB by Protein ID:ENSP00000503870
Original member Current member EBI ENST00000678501.1 ENSP00000503961.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678501.1Link to Ensembl Protein Viewer:ENSP00000503961.1Re-query CCDS DB by Nucleotide ID:ENST00000678501Re-query CCDS DB by Protein ID:ENSP00000503961
Original member Current member EBI ENST00000678935.1 ENSP00000504023.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678935.1Link to Ensembl Protein Viewer:ENSP00000504023.1Re-query CCDS DB by Nucleotide ID:ENST00000678935Re-query CCDS DB by Protein ID:ENSP00000504023
Original member Current member EBI ENST00000679243.1 ENSP00000504415.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679243.1Link to Ensembl Protein Viewer:ENSP00000504415.1Re-query CCDS DB by Nucleotide ID:ENST00000679243Re-query CCDS DB by Protein ID:ENSP00000504415
Original member Current member EBI ENST00000677839.1 ENSP00000504439.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677839.1Link to Ensembl Protein Viewer:ENSP00000504439.1Re-query CCDS DB by Nucleotide ID:ENST00000677839Re-query CCDS DB by Protein ID:ENSP00000504439
Original member Current member EBI ENST00000679318.1 ENSP00000504571.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679318.1Link to Ensembl Protein Viewer:ENSP00000504571.1Re-query CCDS DB by Nucleotide ID:ENST00000679318Re-query CCDS DB by Protein ID:ENSP00000504571
Original member Current member EBI ENST00000676903.1 ENSP00000504660.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676903.1Link to Ensembl Protein Viewer:ENSP00000504660.1Re-query CCDS DB by Nucleotide ID:ENST00000676903Re-query CCDS DB by Protein ID:ENSP00000504660
Original member Current member EBI ENST00000678962.1 ENSP00000504721.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678962.1Link to Ensembl Protein Viewer:ENSP00000504721.1Re-query CCDS DB by Nucleotide ID:ENST00000678962Re-query CCDS DB by Protein ID:ENSP00000504721
Original member Current member EBI ENST00000676749.1 ENSP00000504799.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676749.1Link to Ensembl Protein Viewer:ENSP00000504799.1Re-query CCDS DB by Nucleotide ID:ENST00000676749Re-query CCDS DB by Protein ID:ENSP00000504799
Original member Current member EBI ENST00000676524.1 ENSP00000504831.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676524.1Link to Ensembl Protein Viewer:ENSP00000504831.1Re-query CCDS DB by Nucleotide ID:ENST00000676524Re-query CCDS DB by Protein ID:ENSP00000504831
Original member Current member NCBI NM_002137.4 NP_002128.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002137.4Link to Protein Sequence:NP_002128.1Re-query CCDS DB by Nucleotide ID:NM_002137Re-query CCDS DB by Protein ID:NP_002128Link to BLAST:NP_002128.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002128.1 341 P22626-2 341 100% 0 0

Chromosomal Locations for CCDS 5397.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26192516 26192577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26193251 26193373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26193575 26193694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26195847 26195909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26196401 26196481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26196557 26196658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26196807 26197017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26197315 26197461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26197622 26197732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26200572 26200577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGAGAGAGAAAAGGAACAGTTCCGTAAGCTCTTTATTGGTGGCTTAAGCTTTGAAACCACAGAAGAAA
GTTTGAGGAACTACTACGAACAATGGGGAAAGCTTACAGACTGTGTGGTAATGAGGGATCCTGCAAGCAA
AAGATCAAGAGGATTTGGTTTTGTAACTTTTTCATCCATGGCTGAGGTTGATGCTGCCATGGCTGCAAGA
CCTCATTCAATTGATGGGAGAGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAATCTGGAAAACCAG
GGGCTCATGTAACTGTGAAGAAGCTGTTTGTTGGCGGAATTAAAGAAGATACTGAGGAACATCACCTTAG
AGATTACTTTGAGGAATATGGAAAAATTGATACCATTGAGATAATTACTGATAGGCAGTCTGGAAAGAAA
AGAGGCTTTGGCTTTGTTACTTTTGATGACCATGATCCTGTGGATAAAATCGTATTGCAGAAATACCATA
CCATCAATGGTCATAATGCAGAAGTAAGAAAGGCTTTGTCTAGACAAGAAATGCAGGAAGTTCAGAGTTC
TAGGAGTGGAAGAGGAGGCAACTTTGGCTTTGGGGATTCACGTGGTGGCGGTGGAAATTTCGGACCAGGA
CCAGGAAGTAACTTTAGAGGAGGATCTGATGGATATGGCAGTGGACGTGGATTTGGGGATGGCTATAATG
GGTATGGAGGAGGACCTGGAGGTGGCAATTTTGGAGGTAGCCCCGGTTATGGAGGAGGAAGAGGAGGATA
TGGTGGTGGAGGACCTGGATATGGCAACCAGGGTGGGGGCTACGGAGGTGGTTATGACAACTATGGAGGA
GGAAATTATGGAAGTGGAAATTACAATGATTTTGGAAATTATAACCAGCAACCTTCTAACTACGGTCCAA
TGAAGAGTGGAAACTTTGGTGGTAGCAGGAACATGGGGGGACCATATGGTGGAGGAAACTATGGTCCAGG
AGGCAGTGGAGGAAGTGGGGGTTATGGTGGGAGGAGCCGATACTGA

Translation (341 aa):
MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAAR
PHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKK
RGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGDSRGGGGNFGPG
PGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGG
GNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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