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Report for CCDS37016.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37016.1 Public Mus musculus 14 Stk24 23 108 98 CCDS HistoryNCBI Gene:223255Re-query CCDS DB by CCDS ID:37016.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37016.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000079817.7 ENSMUSP00000078746.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000079817.7Link to Ensembl Protein Viewer:ENSMUSP00000078746.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000079817Re-query CCDS DB by Protein ID:ENSMUSP00000078746
Original member Current member NCBI NM_145465.2 NP_663440.1 Accepted alive Link to Nucleotide Sequence:NM_145465.2Link to Protein Sequence:NP_663440.1Re-query CCDS DB by Nucleotide ID:NM_145465Re-query CCDS DB by Protein ID:NP_663440Link to BLAST:NP_663440.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663440.1 431 Q99KH8 431 100% 0 0

Chromosomal Locations for CCDS 37016.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 121287328 121287364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121291980 121292116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121293421 121293489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121294190 121294313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121294655 121294800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121297135 121297320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121302186 121302343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121302747 121302855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121308015 121308071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121337422 121337652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 121378898 121378939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGGCCCACTCCCCGGTGCAGTCGGGCCTGCCGGGCATGCAGAACCTGAAAGCAGACCCAGAAGAGCTTT
TTACCAAGCTAGAGAAGATTGGAAAGGGCTCTTTTGGTGAAGTGTTCAAAGGCATTGACAATCGGACTCA
GAAAGTGGTGGCCATAAAAATCATTGATCTGGAAGAAGCCGAGGACGAGATAGAGGACATCCAACAAGAG
ATCACAGTGCTGAGCCAGTGTGACAGTCCCTACGTCACCAAGTACTATGGATCCTATCTCAAGGATACTA
AGTTGTGGATAATCATGGAGTATCTTGGTGGAGGCTCTGCCCTGGATCTGTTAGAGCCTGGCCCTTTAGA
TGAAATTCAGATTGCAACCATATTACGAGAAATTCTGAAAGGACTTGATTATCTACACTCGGAGAAGAAA
ATTCACAGAGATATTAAAGCGGCCAATGTTCTGCTCTCTGAACATGGAGAGGTGAAGCTGGCAGACTTTG
GAGTGGCCGGCCAGCTGACGGATACCCAGATCAAAAGGAACACCTTCGTGGGTACCCCCTTCTGGATGGC
GCCGGAGGTCATCAAGCAGTCAGCCTACGACTCAAAGGCAGACATCTGGTCCCTTGGCATCACCGCAATA
GAACTGGCCAAAGGAGAGCCACCACATTCTGAGCTGCACCCCATGAAGGTGTTATTCCTCATCCCAAAGA
ACAACCCTCCCACACTGGAAGGGAACTACAGCAAACCCCTCAAGGAGTTCGTGGAGGCCTGCCTGAACAA
GGAGCCCAGCTTTAGGCCCACTGCTAAGGAATTATTGAAGCACAAATTCATAATCCGCAATGCAAAGAAA
ACGTCCTACTTGACCGAGCTTATCGACAGGTACAAGAGGTGGAAGGCGGAGCAGAGCCACGAGGACTCCA
GCTCGGAGGACTCTGACGTGGAGACAGATGGCCAGGCGTCTGGAGGCAGCGACTCTGGGGACTGGATCTT
CACTATCCGGGAGAAAGATCCCAAGAATCTGGAGAACGGAACTCTTCAGCTCTCGGACTTGGAAAGAAAT
AAGATGAAAGATATCCCAAAGAGGCCTTTCTCTCAGTGTTTATCCACAATCATTTCTCCTCTGTTTGCGG
AGCTGAAAGAGAAGAGCCAGGCATGCGGAGGGAACTTGGGGTCAATAGAAGAGCTGCGGGGAGCCATCTA
CTTGGCGGAAGAGGCCTGCCCTGGGATCTCAGACACTATGGTGGCACAGCTTGTGCAGCGGCTGCAGAGA
TATTCTCTGAGTGGCGGAGGAGCCTCAGCGCACTGA

Translation (431 aa):
MAHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE
ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDEIQIATILREILKGLDYLHSEKK
IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAI
ELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIIRNAKK
TSYLTELIDRYKRWKAEQSHEDSSSEDSDVETDGQASGGSDSGDWIFTIREKDPKNLENGTLQLSDLERN
KMKDIPKRPFSQCLSTIISPLFAELKEKSQACGGNLGSIEELRGAIYLAEEACPGISDTMVAQLVQRLQR
YSLSGGGASAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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