CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS94196.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
94196.1 |
Public |
Homo sapiens |
7 |
TNPO3 |
24 |
110 |
108 |
|
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 94196.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000471166.1 |
ENSP00000418267.1 |
|
Accepted |
alive |
|
|
|
EBI |
ENST00000627585.2 |
ENSP00000487231.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001382216.1 |
NP_001369145.1 |
|
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001369145.1 |
957 |
Q9Y5L0-1 |
957 |
99.791% |
0 |
2 |
Chromosomal Locations for CCDS 94196.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2874 nt): ATGGAAGGAGCAAAGCCGACATTGCAGCTCGTGTACCAGGCAGTGCAGGCGCTTTACCACGACCCAGATC CCAGCGGAAAGGAGCGCGCCTCTTTTTGGCTTGGGGAGCTGCAGCGTTCGGTTCATGCATGGGAGATCTC AGACCAGTTGTTACAGATCCGGCAGGATGTGGAGTCATGCTATTTTGCTGCACAGACCATGAAAATGAAG ATTCAGACCTCATTTTATGAGCTCCCCACAGACTCTCATGCCTCTTTACGGGACTCATTGCTAACCCATA TCCAGAACTTGAAAGACTTGTCACCTGTTATTGTAACGCAGCTGGCTTTAGCAATAGCAGATCTTGCCCT ACAGATGCCTTCCTGGAAGGGATGTGTGCAAACACTGGTGGAAAAATACAGCAATGATGTGACTTCTTTG CCTTTTTTGCTGGAGATCCTTACAGTGTTACCTGAAGAAGTACATAGTCGTTCCTTACGAATTGGAGCTA ATCGGCGCACAGAAATTATAGAAGATTTGGCCTTCTACTCTAGTACAGTAGTATCTCTATTGATGACCTG TGTAGAAAAAGCAGGAACAGATGAGAAAATGCTTATGAAGGTTTTTCGCTGTTTGGGAAGTTGGTTTAAC TTGGGAGTTTTGGACAGTAACTTCATGGCTAACAATAAATTACTAGCACTCCTTTTTGAGGTTTTGCAAC AGGATAAGACCTCGTCTAACCTACATGAAGCTGCTTCGGACTGTGTATGCTCAGCTCTCTATGCCATTGA GAATGTGGAGACTAACTTGCCATTAGCCATGCAACTTTTTCAGGGAGTGCTGACATTGGAGACTGCCTAT CATATGGCCGTGGCACGTGAAGATTTAGACAAAGTTCTGAATTACTGCCGTATTTTCACTGAACTATGTG AAACTTTTCTTGAAAAAATTGTTTGTACTCCAGGCCAAGGTCTTGGGGACCTTCGAACTCTGGAGCTGCT GCTTATCTGTGCAGGCCATCCTCAATATGAGGTAGTAGAAATTTCATTTAACTTTTGGTACCGACTGGGG GAACATTTGTACAAAACTAACGATGAAGTTATTCATGGCATCTTCAAAGCTTACATTCAGAGGCTGCTTC ACGCCTTGGCTCGACACTGCCAGCTGGAACCAGACCATGAGGGGGTTCCTGAGGAGACTGATGACTTTGG GGAGTTTCGCATGAGGGTATCAGACCTGGTAAAGGACTTGATTTTCTTGATAGGGTCTATGGAGTGTTTT GCTCAGTTATATTCTACTCTGAAAGAAGGCAACCCACCCTGGGAGGTGACAGAAGCGGTTCTCTTTATCA TGGCTGCTATAGCAAAGAGTGTTGATCCAAAGAAGCCCTTTAGCAATGCTGTGTGTCGTCACAGCCTGTT ATTTGGCCAGAATATAACCTCTGAAATCAGTAACTGTGAGTACTTACCGCCTGTACTCAGGGAAAACAAT CCAACACTTGTGGAAGTCCTAGAAGGAGTTGTCCGCCTCCCGGAGACCGTACATACGGCTGTGCGATACA CCAGCATTGAATTGGTTGGAGAGATGAGTGAAGTCGTTGATCGAAATCCTCAGTTCCTTGACCCTGTGTT GGGCTATTTGATGAAAGGCCTGTGTGAAAAGCCCCTGGCTTCTGCTGCAGCCAAAGCCATTCATAACATT TGCTCTGTCTGCCGAGATCACATGGCTCAGCACTTTAATGGACTCCTGGAGATTGCCCGCTCCCTCGATT CCTTCCTGTTGTCTCCAGAAGCTGCTGTGGGCTTGCTAAAAGGGACAGCACTTGTCCTAGCCCGATTACC TTTGGATAAGATTACCGAATGTCTTAGTGAACTATGTTCTGTTCAGGTTATGGCATTGAAAAAGCTGTTG TCTCAAGAGCCCAGCAATGGCATATCCTCAGATCCCACAGTGTTCTTAGATCGCCTTGCAGTGATATTTA GGCATACCAATCCCATTGTGGAAAATGGACAGACTCATCCGTGTCAGAAAGTCATACAGGAAATATGGCC AGTTTTATCCGAGACTCTAAATAAGCACCGAGCTGATAATCGGATTGTAGAGCGTTGTTGCAGGTGCCTG CGCTTTGCTGTTCGCTGTGTAGGCAAAGGATCTGCAGCACTGCTGCAGCCACTAGTCACACAGATGGTGA ATGTGTACCACGTACATCAGCATTCCTGCTTCCTGTACCTTGGCAGTATCCTTGTGGATGAATATGGCAT GGAAGAAGGCTGTCGGCAGGGACTGCTAGACATGCTCCAGGCACTGTGCATCCCCACCTTTCAGCTCCTA GAACAGCAGAATGGTCTCCAGAATCACCCTGACACTGTAGATGACCTGTTCCGGCTAGCCACCAGGTTTA TTCAGCGTAGCCCTGTCACCTTGCTGCGGAGCCAAGTGGTCATCCCTATCTTACAGTGGGCCATTGCCTC TACTACCCTGGACCACCGGGATGCCAATTGTAGTGTCATGAGGTTTCTACGAGACCTCATTCATACAGGG GTAGCCAATGATCATGAAGAAGACTTTGAATTACGGAAAGAACTGATTGGACAGGTGATGAACCAGCTTG GACAGCAGCTTGTCAGCCAGCTGCTGCACACCTGCTGCTTTTGCCTCCCCCCCTATACCCTACCAGATGT GGCTGAAGTGCTCTGGGAGATCATGCAGGTTGACAGACCGACTTTTTGTCGATGGTTAGAAAATTCCTTA AAAGGTTTGCCAAAGGAAACAACCGTGGGAGCCGTCACAGTGACACACAAACAACTTACAGACTTCCACA AGCAAGTCACTAGTGCTGAGGAATGTAAACAAGTTTGCTGGGCCTTGCGAGACTTCACCAGGTTGTTTCG ATAG
Translation (957 aa): MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESCYFAAQTMKMK IQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSL PFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSWFN LGVLDSNFMANNKLLALLFEVLQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAY HMAVAREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLG EHLYKTNDEVIHGIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPKKPFSNAVCRHSLLFGQNITSEISNCEYLPPVLRENN PTLVEVLEGVVRLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNI CSVCRDHMAQHFNGLLEIARSLDSFLLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLL SQEPSNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVERCCRCL RFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFQLL EQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRDANCSVMRFLRDLIHTG VANDHEEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSL KGLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR
|