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Report for CCDS31751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31751.1 Public Homo sapiens 12 PLBD1 24 110 108 CCDS HistoryNCBI Gene:79887Re-query CCDS DB by CCDS ID:31751.1Re-query CCDS DB by GeneID:79887See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000240617.10 ENSP00000240617.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000240617.10Link to Ensembl Protein Viewer:ENSP00000240617.5Re-query CCDS DB by Nucleotide ID:ENST00000240617Re-query CCDS DB by Protein ID:ENSP00000240617
Original member Current member NCBI NM_024829.6 NP_079105.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024829.6Link to Protein Sequence:NP_079105.4Re-query CCDS DB by Nucleotide ID:NM_024829Re-query CCDS DB by Protein ID:NP_079105Link to BLAST:NP_079105.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079105.4 553 Q6P4A8 553 100% 0 0

Chromosomal Locations for CCDS 31751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 14503772 14503954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14506162 14506268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14506933 14507118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14511260 14511400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14511511 14511711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14535659 14535803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14536570 14536710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14540764 14540902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14542208 14542291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14553193 14553412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14567582 14567696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1662 nt):
ATGACCCGCGGCGGTCCGGGCGGGCGCCCGGGGCTGCCACAGCCGCCACCGCTTCTGCTGCTGCTGCTGC
TGCTGCCGCTGTTGTTAGTCACCGCGGAGCCGCCGAAACCTGCAGGAGTCTACTATGCAACTGCATACTG
GATGCCTGCTGAAAAGACAGTACAAGTCAAAAATGTAATGGACAAGAATGGGGACGCCTATGGCTTTTAC
AATAACTCTGTGAAAACCACAGGCTGGGGCATCCTGGAGATCAGAGCTGGCTATGGCTCTCAAACCCTGA
GCAATGAGATCATCATGTTTGTGGCTGGCTTTTTGGAGGGTTACCTCACTGCCCCACACATGAATGACCA
CTACACAAACCTCTACCCACAGCTGATCACGAAACCTTCCATCATGGATAAAGTGCAGGATTTTATGGAG
AAGCAAGATAAGTGGACCCGGAAAAATATCAAAGAATACAAGACTGATTCATTTTGGAGACATACAGGCT
ATGTGATGGCACAAATAGATGGCCTCTATGTAGGAGCAAAGAAGAGGGCTATATTAGAAGGGACAAAGCC
AATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTGGAGATCTATTGGATCTGATTCCCTCACTCTCT
CCCACAAAAAACGGCAGCCTAAAGGTTTTTAAGAGATGGGACATGGGACATTGCTCCGCTCTTATCAAGG
TTCTTCCTGGATTTGAGAACATCCTTTTTGCTCACTCAAGCTGGTACACGTATGCAGCCATGCTCAGGAT
ATATAAACACTGGGACTTCAACGTCATAGATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTAC
CCAGGGTTTTTGGAGTCTCTGGATGATTTTTACATTCTTAGCAGTGGATTGATATTGCTGCAGACCACAA
ACAGTGTGTTTAATAAAACCCTGCTAAAGCAGGTAATACCCGAGACTCTCCTGTCCTGGCAAAGAGTCCG
TGTGGCCAATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAAATACAACTCTGGCACC
TATAACAATCAATACATGGTTCTGGACCTGAAGAAAGTAAAGCTGAACCACAGTCTTGACAAAGGCACTC
TGTACATTGTGGAGCAAATTCCTACATATGTAGAATATTCTGAACAAACTGATGTTCTACGGAAAGGATA
TTGGCCCTCCTACAATGTTCCTTTCCATGAAAAAATCTACAACTGGAGTGGCTATCCACTGTTAGTTCAG
AAGCTGGGCTTGGACTACTCTTATGATTTAGCTCCACGAGCCAAAATTTTCCGGCGTGACCAAGGGAAAG
TGACTGATACGGCATCCATGAAATATATCATGCGATACAACAATTATAAGAAGGATCCTTACAGTAGAGG
TGACCCCTGTAATACCATCTGCTGCCGTGAGGACCTGAACTCACCTAACCCAAGTCCTGGAGGTTGTTAT
GACACAAAGGTGGCAGATATCTACCTAGCATCTCAGTACACATCCTATGCCATAAGTGGTCCCACAGTAC
AAGGTGGCCTCCCTGTTTTTCGCTGGGACCGTTTCAACAAAACTCTACATCAGGGCATGCCAGAGGTCTA
CAACTTTGATTTTATTACCATGAAACCAATTTTGAAACTTGATATAAAATGA

Translation (553 aa):
MTRGGPGGRPGLPQPPPLLLLLLLLPLLLVTAEPPKPAGVYYATAYWMPAEKTVQVKNVMDKNGDAYGFY
NNSVKTTGWGILEIRAGYGSQTLSNEIIMFVAGFLEGYLTAPHMNDHYTNLYPQLITKPSIMDKVQDFME
KQDKWTRKNIKEYKTDSFWRHTGYVMAQIDGLYVGAKKRAILEGTKPMTLFQIQFLNSVGDLLDLIPSLS
PTKNGSLKVFKRWDMGHCSALIKVLPGFENILFAHSSWYTYAAMLRIYKHWDFNVIDKDTSSSRLSFSSY
PGFLESLDDFYILSSGLILLQTTNSVFNKTLLKQVIPETLLSWQRVRVANMMADSGKRWADIFSKYNSGT
YNNQYMVLDLKKVKLNHSLDKGTLYIVEQIPTYVEYSEQTDVLRKGYWPSYNVPFHEKIYNWSGYPLLVQ
KLGLDYSYDLAPRAKIFRRDQGKVTDTASMKYIMRYNNYKKDPYSRGDPCNTICCREDLNSPNPSPGGCY
DTKVADIYLASQYTSYAISGPTVQGGLPVFRWDRFNKTLHQGMPEVYNFDFITMKPILKLDIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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