|
Abelson murine leukemia virus
|
2 |
2 |
1
|
|
Acidithiobacillus ferrooxidans
|
1 |
1 |
1
|
|
Acidithiobacillus ferrooxidans ATCC 53993
|
1 |
1 |
1
|
|
Acinetobacter sp. ADP1
|
1 |
1 |
1
|
|
Actinobacillus pleuropneumoniae serovar 3 str. JL03
|
2 |
2 |
2
|
|
Actinobacillus pleuropneumoniae serovar 7 str. AP76
|
1 |
1 |
1
|
|
Adeno-associated virus - 1
|
1 |
1 |
1
|
|
Adeno-associated virus - 2
|
14 |
7 |
9
|
|
Aedes aegypti (yellow fever mosquito)
|
3 |
3 |
3
|
|
Aeromonas hydrophila subsp. hydrophila ATCC 7966
|
1 |
1 |
1
|
|
Aeromonas phage Aeh1
|
2 |
1 |
2
|
|
Aeromonas salmonicida subsp. salmonicida
|
1 |
1 |
1
|
|
Aeropyrum pernix K1
|
14 |
13 |
13
|
|
African cassava mosaic virus
|
1 |
1 |
1
|
|
African horsesickness virus
|
1 |
1 |
1
|
|
African swine fever virus
|
8 |
8 |
6
|
|
Agrobacterium rhizogenes
|
1 |
1 |
1
|
|
Agrobacterium tumefaciens
|
16 |
13 |
11
|
|
Agrobacterium tumefaciens str. C58
|
47 |
36 |
42
|
|
Ajellomyces capsulatus NAm1
|
1 |
1 |
1
|
|
Alcelaphine herpesvirus 1 (wildebeest herpesvirus)
|
1 |
1 |
1
|
|
Alfalfa mosaic virus
|
1 |
1 |
1
|
|
Alkalilimnicola ehrlichei MLHE-1
|
1 |
1 |
1
|
|
Anabaena variabilis ATCC 29413
|
1 |
1 |
1
|
|
Andes virus
|
2 |
2 |
1
|
|
Anopheles gambiae str. PEST
|
33 |
27 |
27
|
|
Anticarsia gemmatalis nucleopolyhedrovirus
|
1 |
1 |
1
|
|
Apis mellifera (honey bee)
|
49 |
41 |
40
|
|
Apple latent spherical virus
|
1 |
1 |
1
|
|
Aquifex aeolicus VF5
|
18 |
16 |
15
|
|
Arabidopsis thaliana (thale cress)
|
3829 |
2788 |
2253
|
|
Archaeoglobus fulgidus DSM 4304
|
21 |
20 |
20
|
|
Arthrobacter nitroguajacolicus
|
1 |
1 |
1
|
|
Artibeus jamaicensis (Jamaican fruit-eating bat)
|
1 |
1 |
1
|
|
Ashbya gossypii ATCC 10895
|
3 |
3 |
3
|
|
Aspergillus clavatus NRRL 1
|
1 |
1 |
1
|
|
Aspergillus fumigatus Af293
|
32 |
30 |
28
|
|
Aspergillus nidulans FGSC A4
|
25 |
20 |
21
|
|
Aspergillus niger CBS 513.88
|
1 |
1 |
1
|
|
Aspergillus oryzae RIB40
|
1 |
1 |
1
|
|
Autographa californica nucleopolyhedrovirus
|
17 |
15 |
12
|
|
Avian metapneumovirus
|
2 |
2 |
1
|
|
Azoarcus sp. BH72
|
1 |
1 |
1
|
|
Azorhizobium caulinodans ORS 571
|
1 |
1 |
1
|
|
BK polyomavirus
|
2 |
2 |
1
|
|
Bacillus amyloliquefaciens FZB42
|
2 |
2 |
2
|
|
Bacillus anthracis str. 'Ames Ancestor'
|
32 |
26 |
15
|
|
Bacillus anthracis str. A2012
|
2 |
2 |
2
|
|
Bacillus anthracis str. Ames
|
9 |
5 |
8
|
|
Bacillus anthracis str. Sterne
|
4 |
3 |
4
|
|
Bacillus cereus ATCC 10987
|
4 |
4 |
3
|
|
Bacillus cereus ATCC 14579
|
15 |
15 |
11
|
|
Bacillus cereus E33L
|
8 |
8 |
7
|
|
Bacillus cereus subsp. cytotoxis NVH 391-98
|
1 |
1 |
1
|
|
Bacillus halodurans C-125
|
7 |
7 |
7
|
|
Bacillus licheniformis ATCC 14580
|
6 |
6 |
5
|
|
Bacillus phage GA-1
|
1 |
1 |
1
|
|
Bacillus phage PZA
|
7 |
6 |
6
|
|
Bacillus phage SPP1
|
1 |
1 |
1
|
|
Bacillus phage phi29
|
2 |
2 |
2
|
|
Bacillus subtilis subsp. subtilis str. 168
|
455 |
335 |
326
|
|
Bacillus thuringiensis
|
1 |
1 |
1
|
|
Bacillus thuringiensis serovar israelensis
|
6 |
5 |
3
|
|
Bacillus thuringiensis serovar konkukian str. 97-27
|
3 |
2 |
3
|
|
Bacteroides fragilis NCTC 9343
|
3 |
3 |
3
|
|
Bacteroides thetaiotaomicron VPI-5482
|
2 |
2 |
2
|
|
Bamboo mosaic virus
|
1 |
1 |
1
|
|
Banna virus
|
1 |
1 |
1
|
|
Barley stripe mosaic virus
|
1 |
1 |
1
|
|
Bartonella quintana str. Toulouse
|
3 |
1 |
3
|
|
Bdellovibrio bacteriovorus HD100
|
1 |
1 |
1
|
|
Beet curly top virus
|
1 |
1 |
1
|
|
Beet necrotic yellow vein virus
|
1 |
1 |
1
|
|
Beet yellows virus
|
2 |
2 |
1
|
|
Bhendi yellow vein mosaic virus
|
1 |
1 |
1
|
|
Bhendi yellow vein mosaic virus satellite DNA beta
|
1 |
1 |
1
|
|
Bifidobacterium longum NCC2705
|
2 |
2 |
2
|
|
Blackcurrant reversion virus
|
1 |
1 |
1
|
|
Bluetongue virus
|
6 |
6 |
6
|
|
Bombyx mori (domestic silkworm)
|
64 |
48 |
54
|
|
Bombyx mori NPV
|
9 |
9 |
7
|
|
Bordetella bronchiseptica RB50
|
10 |
7 |
9
|
|
Bordetella parapertussis 12822
|
2 |
1 |
2
|
|
Bordetella pertussis Tohama I
|
17 |
15 |
9
|
|
Borna disease virus
|
7 |
7 |
4
|
|
Borrelia afzelii PKo
|
2 |
2 |
2
|
|
Borrelia burgdorferi B31
|
63 |
43 |
31
|
|
Borrelia garinii PBi
|
2 |
2 |
1
|
|
Bos indicus (zebu)
|
2 |
2 |
2
|
|
Bos taurus (cattle)
|
2255 |
1758 |
988
|
|
Bovine coronavirus
|
3 |
1 |
3
|
|
Bovine ephemeral fever virus
|
2 |
1 |
2
|
|
Bovine herpesvirus 1
|
17 |
15 |
9
|
|
Bovine herpesvirus 5
|
1 |
1 |
1
|
|
Bovine immunodeficiency virus
|
3 |
3 |
2
|
|
Bovine papillomavirus - 1
|
18 |
16 |
6
|
|
Bovine papular stomatitis virus
|
1 |
1 |
1
|
|
Bovine respiratory syncytial virus
|
1 |
1 |
1
|
|
Bovine viral diarrhea virus 1
|
5 |
5 |
1
|
|
Bradyrhizobium japonicum USDA 110
|
31 |
24 |
26
|
|
Brome mosaic virus
|
3 |
2 |
2
|
|
Brucella abortus bv. 1 str. 9-941
|
5 |
4 |
5
|
|
Brucella melitensis 16M
|
2 |
2 |
2
|
|
Brucella melitensis biovar Abortus 2308
|
10 |
4 |
10
|
|
Brucella suis 1330
|
11 |
7 |
10
|
|
Bunyamwera virus
|
1 |
1 |
1
|
|
Burkholderia cenocepacia AU 1054
|
2 |
2 |
2
|
|
Burkholderia mallei ATCC 23344
|
2 |
2 |
2
|
|
Burkholderia multivorans ATCC 17616
|
1 |
1 |
1
|
|
Burkholderia pseudomallei K96243
|
9 |
8 |
6
|
|
Burkholderia thailandensis E264
|
1 |
1 |
1
|
|
Burkholderia xenovorans LB400
|
5 |
4 |
4
|
|
Caenorhabditis elegans (nematode)
|
1749 |
1230 |
1017
|
|
Campylobacter coli
|
1 |
1 |
1
|
|
Campylobacter jejuni RM1221
|
1 |
1 |
1
|
|
Campylobacter jejuni subsp. jejuni 81-176
|
3 |
3 |
3
|
|
Campylobacter jejuni subsp. jejuni 81116
|
1 |
1 |
1
|
|
Campylobacter jejuni subsp. jejuni NCTC 11168
|
40 |
30 |
39
|
|
Candida albicans SC5314
|
89 |
73 |
76
|
|
Candida glabrata CBS 138
|
7 |
4 |
7
|
|
Candidatus Pelagibacter ubique HTCC1062
|
1 |
1 |
1
|
|
Canine distemper virus
|
3 |
3 |
2
|
|
Canine parvovirus
|
1 |
1 |
1
|
|
Canis lupus familiaris (dog)
|
752 |
565 |
481
|
|
Carboxydothermus hydrogenoformans Z-2901
|
1 |
1 |
1
|
|
Cauliflower mosaic virus
|
1 |
1 |
1
|
|
Caulobacter crescentus CB15
|
51 |
28 |
42
|
|
Cercopithecine herpesvirus 9 (Simian varicella virus)
|
1 |
1 |
1
|
|
Cereal yellow dwarf virus - RPS
|
1 |
1 |
1
|
|
Chicken anemia virus
|
8 |
8 |
1
|
|
Chlamydia muridarum Nigg
|
2 |
2 |
2
|
|
Chlamydia trachomatis A/HAR-13
|
2 |
2 |
2
|
|
Chlamydia trachomatis D/UW-3/CX
|
11 |
9 |
9
|
|
Chlamydia trachomatis L2b/UCH-1/proctitis
|
3 |
3 |
3
|
|
Chlamydomonas reinhardtii
|
30 |
26 |
27
|
|
Chlamydophila abortus S26/3
|
1 |
1 |
1
|
|
Chlamydophila pneumoniae AR39
|
5 |
5 |
5
|
|
Chlamydophila pneumoniae CWL029
|
4 |
4 |
4
|
|
Chlamydophila pneumoniae TW-183
|
2 |
2 |
2
|
|
Chlorobium tepidum TLS
|
21 |
12 |
19
|
|
Chromobacterium violaceum ATCC 12472
|
3 |
1 |
3
|
|
Ciona intestinalis
|
34 |
25 |
29
|
|
Citrus tristeza virus
|
2 |
2 |
2
|
|
Classical swine fever virus
|
10 |
10 |
1
|
|
Clostridium acetobutylicum ATCC 824
|
11 |
8 |
11
|
|
Clostridium botulinum A str. ATCC 3502
|
2 |
2 |
2
|
|
Clostridium botulinum B1 str. Okra
|
1 |
1 |
1
|
|
Clostridium botulinum F str. Langeland
|
1 |
1 |
1
|
|
Clostridium difficile 630
|
8 |
4 |
6
|
|
Clostridium kluyveri DSM 555
|
2 |
2 |
2
|
|
Clostridium perfringens
|
2 |
2 |
2
|
|
Clostridium perfringens ATCC 13124
|
2 |
2 |
2
|
|
Clostridium perfringens SM101
|
2 |
2 |
2
|
|
Clostridium perfringens str. 13
|
14 |
12 |
9
|
|
Clostridium tetani E88
|
2 |
2 |
2
|
|
Clostridium thermocellum ATCC 27405
|
2 |
1 |
2
|
|
Colwellia psychrerythraea 34H
|
1 |
1 |
1
|
|
Corynebacterium diphtheriae NCTC 13129
|
10 |
8 |
7
|
|
Corynebacterium glutamicum ATCC 13032
|
58 |
45 |
55
|
|
Corynebacterium glutamicum R
|
4 |
3 |
4
|
|
Corynebacterium jeikeium
|
1 |
1 |
1
|
|
Cottontail rabbit papillomavirus
|
1 |
1 |
1
|
|
Cowpea chlorotic mottle virus
|
1 |
1 |
1
|
|
Cowpox virus
|
1 |
1 |
1
|
|
Cryptococcus neoformans var. neoformans JEC21
|
16 |
14 |
10
|
|
Cryptosporidium hominis TU502
|
1 |
1 |
1
|
|
Cryptosporidium parvum Iowa II
|
2 |
2 |
2
|
|
Cucumber mosaic virus (cucumber mosaic cucumovirus)
|
7 |
5 |
4
|
|
Cucumber necrosis virus
|
1 |
1 |
1
|
|
Culex quinquefasciatus (southern house mosquito)
|
1 |
1 |
1
|
|
Cymbidium mosaic virus
|
1 |
1 |
1
|
|
Cypovirus 1
|
1 |
1 |
1
|
|
Danio rerio (zebrafish)
|
2096 |
1512 |
1300
|
|
Debaryomyces hansenii CBS767
|
1 |
1 |
1
|
|
Deinococcus geothermalis DSM 11300
|
2 |
2 |
2
|
|
Deinococcus radiodurans R1
|
29 |
27 |
25
|
|
Dengue virus 1
|
3 |
3 |
1
|
|
Dengue virus 2
|
13 |
13 |
1
|
|
Dengue virus 4
|
1 |
1 |
1
|
|
Desulfovibrio desulfuricans subsp. desulfuricans str. G20
|
3 |
3 |
3
|
|
Desulfovibrio vulgaris DP4
|
1 |
1 |
1
|
|
Desulfovibrio vulgaris str. Hildenborough
|
14 |
11 |
14
|
|
Dichelobacter nodosus VCS1703A
|
2 |
1 |
2
|
|
Dictyostelium discoideum AX4
|
71 |
58 |
59
|
|
Drosophila melanogaster (fruit fly)
|
6434 |
4473 |
2194
|
|
Drosophila mojavensis
|
1 |
1 |
1
|
|
Drosophila virilis
|
5 |
5 |
5
|
|
East African cassava mosaic Cameroon virus
|
1 |
1 |
1
|
|
Eastern equine encephalitis virus
|
1 |
1 |
1
|
|
Ectocarpus siliculosus virus 1
|
1 |
1 |
1
|
|
Ectromelia virus
|
3 |
2 |
3
|
|
Ehrlichia ruminantium str. Welgevonden
|
1 |
1 |
1
|
|
Emiliania huxleyi virus 86
|
1 |
1 |
1
|
|
Encephalitozoon cuniculi GB-M1
|
4 |
4 |
3
|
|
Encephalomyocarditis virus
|
1 |
1 |
1
|
|
Entamoeba histolytica HM-1:IMSS
|
10 |
10 |
8
|
|
Enterobacteria phage 933W
|
2 |
2 |
2
|
|
Enterobacteria phage M13
|
2 |
2 |
2
|
|
Enterobacteria phage MS2
|
1 |
1 |
1
|
|
Enterobacteria phage Mu
|
1 |
1 |
1
|
|
Enterobacteria phage N15
|
4 |
4 |
4
|
|
Enterobacteria phage N4
|
1 |
1 |
1
|
|
Enterobacteria phage P1
|
6 |
5 |
4
|
|
Enterobacteria phage P2
|
1 |
1 |
1
|
|
Enterobacteria phage P22
|
7 |
7 |
5
|
|
Enterobacteria phage P4
|
2 |
1 |
2
|
|
Enterobacteria phage RB69
|
4 |
4 |
1
|
|
Enterobacteria phage T3
|
1 |
1 |
1
|
|
Enterobacteria phage T4
|
56 |
46 |
38
|
|
Enterobacteria phage T5
|
1 |
1 |
1
|
|
Enterobacteria phage T7
|
17 |
16 |
6
|
|
Enterobacteria phage lambda
|
13 |
10 |
9
|
|
Enterococcus faecalis
|
6 |
6 |
4
|
|
Enterococcus faecalis V583
|
12 |
8 |
12
|
|
Enterococcus faecium
|
1 |
1 |
1
|
|
Epiphyas postvittana NPV
|
1 |
1 |
1
|
|
Equid herpesvirus 1 (Equine herpesvirus 1)
|
3 |
3 |
2
|
|
Equine arteritis virus
|
3 |
3 |
1
|
|
|