|
Abelson murine leukemia virus
|
2 |
2 |
1
|
|
Acidithiobacillus ferrooxidans
|
1 |
1 |
1
|
|
Acidithiobacillus ferrooxidans ATCC 23270
|
1 |
1 |
1
|
|
Acidithiobacillus ferrooxidans ATCC 53993
|
1 |
1 |
1
|
|
Acinetobacter sp. ADP1
|
1 |
1 |
1
|
|
Actinobacillus pleuropneumoniae L20
|
2 |
2 |
1
|
|
Actinobacillus pleuropneumoniae serovar 3 str. JL03
|
2 |
2 |
2
|
|
Actinobacillus pleuropneumoniae serovar 7 str. AP76
|
1 |
1 |
1
|
|
Acyrthosiphon pisum (pea aphid)
|
1 |
1 |
1
|
|
Adeno-associated virus - 1
|
1 |
1 |
1
|
|
Adeno-associated virus - 2
|
14 |
7 |
9
|
|
Aedes aegypti (yellow fever mosquito)
|
10 |
9 |
10
|
|
Aeromonas hydrophila subsp. hydrophila ATCC 7966
|
1 |
1 |
1
|
|
Aeromonas phage Aeh1
|
3 |
2 |
2
|
|
Aeromonas salmonicida subsp. salmonicida
|
1 |
1 |
1
|
|
Aeropyrum pernix K1
|
16 |
15 |
14
|
|
African cassava mosaic virus
|
1 |
1 |
1
|
|
African horsesickness virus
|
2 |
2 |
2
|
|
African swine fever virus
|
9 |
9 |
6
|
|
Agrobacterium rhizogenes
|
1 |
1 |
1
|
|
Agrobacterium tumefaciens
|
17 |
14 |
11
|
|
Agrobacterium tumefaciens str. C58
|
55 |
42 |
50
|
|
Ajellomyces capsulatus NAm1
|
1 |
1 |
1
|
|
Alcelaphine herpesvirus 1 (wildebeest herpesvirus)
|
1 |
1 |
1
|
|
Alfalfa mosaic virus
|
1 |
1 |
1
|
|
Alkalilimnicola ehrlichii MLHE-1
|
2 |
2 |
2
|
|
Alkaliphilus oremlandii OhILAs
|
1 |
1 |
1
|
|
Anabaena variabilis ATCC 29413
|
1 |
1 |
1
|
|
Andes virus
|
2 |
2 |
1
|
|
Anopheles gambiae str. PEST
|
44 |
34 |
32
|
|
Anticarsia gemmatalis nucleopolyhedrovirus
|
1 |
1 |
1
|
|
Apis mellifera (honey bee)
|
53 |
44 |
42
|
|
Apple latent spherical virus
|
1 |
1 |
1
|
|
Aquifex aeolicus VF5
|
19 |
17 |
16
|
|
Arabidopsis thaliana (thale cress)
|
4475 |
3233 |
2556
|
|
Archaeoglobus fulgidus DSM 4304
|
22 |
21 |
21
|
|
Arthrobacter nitroguajacolicus
|
1 |
1 |
1
|
|
Artibeus jamaicensis (Jamaican fruit-eating bat)
|
1 |
1 |
1
|
|
Ashbya gossypii ATCC 10895
|
5 |
5 |
5
|
|
Aspergillus clavatus NRRL 1
|
1 |
1 |
1
|
|
Aspergillus fumigatus Af293
|
35 |
32 |
30
|
|
Aspergillus nidulans FGSC A4
|
26 |
21 |
22
|
|
Aspergillus niger CBS 513.88
|
4 |
2 |
4
|
|
Aspergillus oryzae RIB40
|
6 |
4 |
6
|
|
Autographa californica nucleopolyhedrovirus
|
22 |
20 |
14
|
|
Avian metapneumovirus
|
2 |
2 |
1
|
|
Azoarcus sp. BH72
|
1 |
1 |
1
|
|
Azorhizobium caulinodans ORS 571
|
1 |
1 |
1
|
|
BK polyomavirus
|
3 |
3 |
2
|
|
Bacillus amyloliquefaciens FZB42
|
3 |
3 |
3
|
|
Bacillus anthracis (anthrax)
|
1 |
1 |
1
|
|
Bacillus anthracis str. 'Ames Ancestor'
|
46 |
36 |
23
|
|
Bacillus anthracis str. A2012
|
2 |
2 |
2
|
|
Bacillus anthracis str. Ames
|
10 |
6 |
9
|
|
Bacillus anthracis str. Sterne
|
5 |
4 |
5
|
|
Bacillus cereus 03BB102
|
1 |
1 |
1
|
|
Bacillus cereus AH820
|
1 |
1 |
1
|
|
Bacillus cereus ATCC 10987
|
4 |
4 |
3
|
|
Bacillus cereus ATCC 14579
|
15 |
15 |
11
|
|
Bacillus cereus E33L
|
9 |
9 |
7
|
|
Bacillus cereus subsp. cytotoxis NVH 391-98
|
1 |
1 |
1
|
|
Bacillus halodurans C-125
|
7 |
7 |
7
|
|
Bacillus licheniformis ATCC 14580
|
6 |
6 |
5
|
|
Bacillus phage GA-1
|
1 |
1 |
1
|
|
Bacillus phage PZA
|
7 |
6 |
6
|
|
Bacillus phage SPP1
|
1 |
1 |
1
|
|
Bacillus phage phi29
|
4 |
4 |
3
|
|
Bacillus subtilis subsp. subtilis str. 168
|
512 |
372 |
362
|
|
Bacillus thuringiensis
|
1 |
1 |
1
|
|
Bacillus thuringiensis serovar israelensis
|
10 |
8 |
5
|
|
Bacillus thuringiensis serovar konkukian str. 97-27
|
3 |
2 |
3
|
|
Bacteroides fragilis NCTC 9343
|
63 |
10 |
61
|
|
Bacteroides thetaiotaomicron VPI-5482
|
3 |
3 |
3
|
|
Bamboo mosaic virus
|
2 |
2 |
1
|
|
Banna virus
|
1 |
1 |
1
|
|
Barley stripe mosaic virus
|
1 |
1 |
1
|
|
Bartonella quintana str. Toulouse
|
3 |
1 |
3
|
|
Bdellovibrio bacteriovorus HD100
|
1 |
1 |
1
|
|
Beet curly top virus
|
1 |
1 |
1
|
|
Beet necrotic yellow vein virus
|
3 |
3 |
2
|
|
Beet yellows virus
|
2 |
2 |
1
|
|
Bhendi yellow vein mosaic virus
|
1 |
1 |
1
|
|
Bhendi yellow vein mosaic virus satellite DNA beta
|
1 |
1 |
1
|
|
Bifidobacterium longum NCC2705
|
2 |
2 |
2
|
|
Blackcurrant reversion virus
|
1 |
1 |
1
|
|
Bluetongue virus
|
8 |
8 |
7
|
|
Bombyx mori (domestic silkworm)
|
93 |
70 |
78
|
|
Bombyx mori NPV
|
19 |
18 |
15
|
|
Bordetella bronchiseptica RB50
|
12 |
9 |
11
|
|
Bordetella parapertussis 12822
|
2 |
1 |
2
|
|
Bordetella pertussis Tohama I
|
20 |
18 |
9
|
|
Borna disease virus
|
9 |
9 |
5
|
|
Borrelia afzelii PKo
|
2 |
2 |
2
|
|
Borrelia burgdorferi B31
|
77 |
53 |
40
|
|
Borrelia burgdorferi ZS7
|
1 |
1 |
1
|
|
Borrelia garinii PBi
|
2 |
2 |
1
|
|
Bos indicus (zebu)
|
2 |
2 |
2
|
|
Bos taurus (cattle)
|
2533 |
1936 |
1094
|
|
Bovine coronavirus
|
5 |
3 |
4
|
|
Bovine ephemeral fever virus
|
2 |
1 |
2
|
|
Bovine herpesvirus 1
|
18 |
16 |
9
|
|
Bovine herpesvirus 5
|
1 |
1 |
1
|
|
Bovine immunodeficiency virus
|
3 |
3 |
2
|
|
Bovine papillomavirus - 1
|
19 |
17 |
6
|
|
Bovine papular stomatitis virus
|
2 |
2 |
2
|
|
Bovine respiratory syncytial virus
|
1 |
1 |
1
|
|
Bovine viral diarrhea virus 1
|
5 |
5 |
1
|
|
Bradyrhizobium japonicum USDA 110
|
34 |
26 |
27
|
|
Bradyrhizobium sp. BTAi1
|
1 |
1 |
1
|
|
Brome mosaic virus
|
4 |
3 |
2
|
|
Brucella abortus bv. 1 str. 9-941
|
6 |
5 |
6
|
|
Brucella melitensis 16M
|
2 |
2 |
2
|
|
Brucella melitensis biovar Abortus 2308
|
12 |
6 |
12
|
|
Brucella suis 1330
|
11 |
7 |
10
|
|
Bunyamwera virus
|
2 |
2 |
1
|
|
Burkholderia cenocepacia AU 1054
|
2 |
2 |
2
|
|
Burkholderia cenocepacia J2315
|
2 |
1 |
2
|
|
Burkholderia mallei ATCC 23344
|
2 |
2 |
2
|
|
Burkholderia multivorans ATCC 17616
|
1 |
1 |
1
|
|
Burkholderia pseudomallei 406e
|
1 |
1 |
1
|
|
Burkholderia pseudomallei K96243
|
9 |
8 |
6
|
|
Burkholderia thailandensis E264
|
2 |
2 |
2
|
|
Burkholderia xenovorans LB400
|
5 |
4 |
4
|
|
Caenorhabditis elegans (nematode)
|
1956 |
1368 |
1097
|
|
Campylobacter coli
|
1 |
1 |
1
|
|
Campylobacter jejuni RM1221
|
2 |
2 |
2
|
|
Campylobacter jejuni subsp. jejuni 81-176
|
5 |
5 |
5
|
|
Campylobacter jejuni subsp. jejuni 81116
|
1 |
1 |
1
|
|
Campylobacter jejuni subsp. jejuni NCTC 11168
|
49 |
37 |
47
|
|
Candida albicans SC5314
|
105 |
88 |
88
|
|
Candida glabrata CBS 138
|
9 |
6 |
8
|
|
Candidatus Pelagibacter ubique HTCC1062
|
1 |
1 |
1
|
|
Canine distemper virus
|
3 |
3 |
2
|
|
Canine parvovirus
|
1 |
1 |
1
|
|
Canis lupus familiaris (dog)
|
905 |
673 |
557
|
|
Carboxydothermus hydrogenoformans Z-2901
|
1 |
1 |
1
|
|
Carnation Italian ringspot virus
|
1 |
1 |
1
|
|
Cauliflower mosaic virus
|
3 |
2 |
3
|
|
Caulobacter crescentus CB15
|
53 |
29 |
44
|
|
Caulobacter crescentus NA1000
|
1 |
1 |
1
|
|
Cavia porcellus (domestic guinea pig)
|
2 |
2 |
2
|
|
Cellvibrio japonicus Ueda107
|
1 |
1 |
1
|
|
Cercopithecine herpesvirus 9 (Simian varicella virus)
|
1 |
1 |
1
|
|
Cereal yellow dwarf virus - RPS
|
1 |
1 |
1
|
|
Chicken anemia virus
|
11 |
11 |
1
|
|
Chikungunya virus
|
1 |
1 |
1
|
|
Chlamydia muridarum Nigg
|
2 |
2 |
2
|
|
Chlamydia trachomatis
|
1 |
1 |
1
|
|
Chlamydia trachomatis A/HAR-13
|
2 |
2 |
2
|
|
Chlamydia trachomatis D/UW-3/CX
|
12 |
10 |
10
|
|
Chlamydia trachomatis L2b/UCH-1/proctitis
|
3 |
3 |
3
|
|
Chlamydomonas reinhardtii
|
44 |
38 |
40
|
|
Chlamydophila abortus S26/3
|
1 |
1 |
1
|
|
Chlamydophila pneumoniae AR39
|
5 |
5 |
5
|
|
Chlamydophila pneumoniae CWL029
|
5 |
5 |
5
|
|
Chlamydophila pneumoniae TW-183
|
2 |
2 |
2
|
|
Chlorobium tepidum TLS
|
22 |
13 |
19
|
|
Chromobacterium violaceum ATCC 12472
|
3 |
1 |
3
|
|
Ciona intestinalis
|
43 |
32 |
37
|
|
Citrus tristeza virus
|
2 |
2 |
2
|
|
Classical swine fever virus
|
14 |
14 |
1
|
|
Clostridium acetobutylicum ATCC 824
|
12 |
9 |
11
|
|
Clostridium botulinum A str. ATCC 3502
|
3 |
3 |
2
|
|
Clostridium botulinum B1 str. Okra
|
1 |
1 |
1
|
|
Clostridium botulinum F str. Langeland
|
1 |
1 |
1
|
|
Clostridium difficile 630
|
8 |
4 |
6
|
|
Clostridium kluyveri DSM 555
|
2 |
2 |
2
|
|
Clostridium perfringens
|
2 |
2 |
2
|
|
Clostridium perfringens ATCC 13124
|
3 |
3 |
3
|
|
Clostridium perfringens SM101
|
8 |
6 |
8
|
|
Clostridium perfringens str. 13
|
18 |
13 |
11
|
|
Clostridium tetani E88
|
2 |
2 |
2
|
|
Clostridium thermocellum ATCC 27405
|
2 |
1 |
2
|
|
Colwellia psychrerythraea 34H
|
1 |
1 |
1
|
|
Corynebacterium diphtheriae NCTC 13129
|
10 |
8 |
7
|
|
Corynebacterium glutamicum ATCC 13032
|
80 |
55 |
77
|
|
Corynebacterium glutamicum R
|
4 |
3 |
4
|
|
Corynebacterium jeikeium
|
1 |
1 |
1
|
|
Cottontail rabbit papillomavirus
|
2 |
2 |
2
|
|
Cowpea chlorotic mottle virus
|
1 |
1 |
1
|
|
Cowpox virus
|
2 |
2 |
2
|
|
Cryptococcus neoformans var. neoformans B-3501A
|
1 |
1 |
1
|
|
Cryptococcus neoformans var. neoformans JEC21
|
18 |
16 |
12
|
|
Cryptosporidium hominis TU502
|
1 |
1 |
1
|
|
Cryptosporidium parvum Iowa II
|
3 |
3 |
3
|
|
Cucumber mosaic virus (cucumber mosaic cucumovirus)
|
9 |
7 |
4
|
|
Cucumber necrosis virus
|
1 |
1 |
1
|
|
Culex quinquefasciatus (southern house mosquito)
|
1 |
1 |
1
|
|
Cymbidium mosaic virus
|
1 |
1 |
1
|
|
Cypovirus 1
|
1 |
1 |
1
|
|
Danio rerio (zebrafish)
|
2368 |
1704 |
1430
|
|
Debaryomyces hansenii CBS767
|
1 |
1 |
1
|
|
Deinococcus geothermalis DSM 11300
|
2 |
2 |
2
|
|
Deinococcus radiodurans R1
|
35 |
31 |
30
|
|
Dendrolimus punctatus tetravirus
|
1 |
1 |
1
|
|
Dengue virus 1
|
5 |
5 |
1
|
|
Dengue virus 2
|
18 |
18 |
1
|
|
Dengue virus 4
|
1 |
1 |
1
|
|
Desulfitobacterium hafniense Y51
|
1 |
1 |
1
|
|
Desulfovibrio desulfuricans subsp. desulfuricans str. G20
|
4 |
4 |
4
|
|
Desulfovibrio vulgaris DP4
|
1 |
1 |
1
|
|
Desulfovibrio vulgaris str. Hildenborough
|
17 |
12 |
17
|
|
Dichelobacter nodosus VCS1703A
|
2 |
1 |
2
|
|
Dictyostelium discoideum AX4
|
81 |
67 |
68
|
|
Drosophila melanogaster (fruit fly)
|
7051 |
4890 |
2336
|
|
Drosophila mojavensis
|
1 |
1 |
1
|
|
Drosophila pseudoobscura pseudoobscura
|
1 |
1 |
1
|
|
Drosophila virilis
|
7 |
7 |
7
|
|
East African cassava mosaic Cameroon virus
|
1 |
1 |
1
|
|
Eastern equine encephalitis virus
|
1 |
1 |
1
|
|
Ectocarpus siliculosus virus 1
|
1 |
1 |
1
|
|
Ectromelia virus
|
3 |
2 |
3
|
|
Ehrlichia ruminantium str. Welgevonden
|
2 |
2 |
2
|
|
Emiliania huxleyi virus 86
|
1 |
1 |
1
|
|
Encephalitozoon cuniculi GB-M1
|
4 |
4 |
3
|
|
Encephalomyocarditis virus
|
2 |
2 |
1
|
|
Entamoeba histolytica HM-1:IMSS
|
14 |
12 |
12
|
|
Enterobacteria phage 933W
|
2 |
2 |
2
|
|
Enterobacteria phage HK97
|
2 |
2 |
1
|
|
Enterobacteria phage M13
|
2 |
2 |
2
|
|
Enterobacteria phage MS2
|
1 |
1 |
1
|
|
Enterobacteria phage Mu
|
1 |
1 |
1
|
|
Enterobacteria phage N15
|
4 |
4 |
4
|
|
Enterobacteria phage N4
|
2 |
2 |
2
|
|
Enterobacteria phage P1
|
6 |
5 |
4
|
|
Enterobacteria phage P2
|
1 |
1 |
1
|
|
Enterobacteria phage P22
|
8 |
8 |
5
|
|
Enterobacteria phage P4
|
3 |
2 |
3
|
|
Enterobacteria phage RB69
|
5 |
5 |
1
|
|
Enterobacteria phage T3
|
1 |
1 |
1
|
|
Enterobacteria phage T4
|
66 |
54 |
38
|
|
Enterobacteria phage T5
|
1 |
1 |
1
|
|
Enterobacteria phage T7
|
20 |
18 |
6
|
|
Enterobacteria phage lambda
|
15 |
12 |
10
|
|
Enterococcus faecalis
|
6 |
6 |
4
|
|
Enterococcus faecalis V583
|
15 |
10 |
14
|
|
Enterococcus faecium
|
1 |
1 |
1
|
|
Epiphyas postvittana NPV
|
1 |
1 |
1
|
|
Equid herpesvirus 1 (Equine herpesvirus 1)
|
3 |
3 |
2
|
|
Equine arteritis virus
|
3 |
3 |
1
|
|
Equine infectious anemia virus
|
3 |
3 |
2
|
|
Equus asinus (ass)
|
1 |
1 |
1
|
|
Equus caballus (horse)
|
108 |
71 |
87
|
|
Erythrobacter litoralis HTCC2594
|
1 |
1 |
1
|
|
Escherichia coli
|
57 |
51 |
44
|
|
Escherichia coli 536
|
1 |
1 |
1
|
|
Escherichia coli APEC O1
|
13 |
12 |
13
|
|
Escherichia coli CFT073
|
82 |
75 |
73
|
|
Escherichia coli E24377A
|
7 |
7 |
7
|
|
Escherichia coli HS
|
8 |
7 |
8
|
|
Escherichia coli LF82
|
1 |
1 |
1
|
|
Escherichia coli O127:H6 str. E2348/69
|
5 |
5 |
4
|
|
Escherichia coli O157:H7 EDL933
|
47 |
41 |
40
|
|
Escherichia coli O157:H7 str. EC4115
|
1 |
1 |
1
|
|
Escherichia coli O157:H7 str. Sakai
|
37 |
31 |
29
|
|
Escherichia coli S88
|
1 |
1 |
1
|
|
Escherichia coli SMS-3-5
|
1 |
1 |
1
|
|
Escherichia coli UTI89
|
18 |
17 |
17
|
|
Escherichia coli str. K-12 substr. DH10B
|
75 |
65 |
69
|
|
Escherichia coli str. K-12 substr. MG1655
|
3900 |
3018 |
1521
|
|
Feline coronavirus
|
1 |
1 |
1
|
|
Feline foamy virus
|
1 |
1 |
1
|
|
Feline immunodeficiency virus
|
8 |
8 |
2
|
|
Feline leukemia virus
|
2 |
2 |
1
|
|
Felis catus (domestic cat)
|
76 |
64 |
55
|
|
Foot-and-mouth disease virus - type A
|
1 |
1 |
1
|
|
Foot-and-mouth disease virus - type C
|
1 |
1 |
1
|
|
Foot-and-mouth disease virus - type O
|
2 |
2 |
1
|
|
Fowlpox virus
|
1 |
1 |
1
|
|
Francisella novicida U112
|
9 |
7 |
8
|
|
Francisella tularensis subsp. holarctica
|
7 |
4 |
6
|
|
Francisella tularensis subsp. holarctica OSU18
|
1 |
1 |
1
|
|
Francisella tularensis subsp. mediasiatica FSC147
|
1 |
1 |
1
|
|
Francisella tularensis subsp. tularensis SCHU S4
|
3 |
3 |
3
|
|
Friend murine leukemia virus
|
1 |
1 |
1
|
|
GB virus C
|
1 |
1 |
1
|
|
Gallid herpesvirus 1
|
6 |
4 |
5
|
|
Gallid herpesvirus 2 (Marek's disease virus type 1)
|
12 |
11 |
10
|
|
Gallid herpesvirus 3 (Marek's disease virus type 2)
|
3 |
2 |
3
|
|
Gallus gallus (chicken)
|
1837 |
1364 |
1046
|
|
Garlic latent virus
|
1 |
1 |
1
|
|
Geobacillus kaustophilus HTA426
|
4 |
4 |
4
|
|
Geobacillus virus E2
|
1 |
1 |
1
|
|
Geobacter sulfurreducens PCA
|
6 |
4 |
6
|
|
Geobacter uraniireducens Rf4
|
1 |
1 |
1
|
|
Giardia lamblia ATCC 50803
|
11 |
10 |
10
|
|
Gibberella zeae PH-1
|
5 |
4 |
5
|
|
Gloeobacter violaceus PCC 7421
|
2 |
2 |
2
|
|
Gluconobacter oxydans 621H
|
4 |
3 |
4
|
|
Glycine max (soybean)
|
62 |
49 |
54
|
|
Haemophilus ducreyi 35000HP
|
11 |
7 |
7
|
|
Haemophilus influenzae 86-028NP
|
11 |
11 |
10
|
|
Haemophilus influenzae PittEE
|
1 |
1 |
1
|
|
Haemophilus influenzae PittGG
|
1 |
1 |
1
|
|
Haemophilus influenzae Rd KW20
|
37 |
32 |
35
|
|
Haloarcula marismortui ATCC 43049
|
2 |
1 |
2
|
|
Halobacterium salinarum R1
|
12 |
9 |
5
|
|
Halobacterium sp. NRC-1
|
15 |
13 |
11
|
|
Hantaan virus
|
2 |
2 |
1
|
|
Helicobacter hepaticus ATCC 51449
|
6 |
6 |
6
|
|
Helicobacter pylori 26695
|
96 |
78 |
79
|
|
Helicobacter pylori G27
|
7 |
6 |
5
|
|
Helicobacter pylori HPAG1
|
7 |
7 |
6
|
|
Helicobacter pylori J99
|
85 |
72 |
24
|
|
Helicobacter pylori P12
|
1 |
1 |
1
|
|
Helicobacter pylori Shi470
|
1 |
1 |
1
|
|
Helicoverpa armigera NPV
|
1 |
1 |
1
|
|
Helicoverpa armigera nucleopolyhedrovirus G4
|
1 |
1 |
1
|
|
Hendra virus
|
5 |
5 |
2
|
|
Hepatitis A virus
|
2 |
2 |
1
|
|
Hepatitis B virus
|
115 |
114 |
4
|
|
Hepatitis C virus
|
173 |
173 |
2
|
|
Hepatitis E virus
|
3 |
3 |
2
|
|
Hepatitis GB virus B
|
3 |
3 |
1
|
|
Hepatitis delta virus
|
6 |
6 |
1
|
|
Homo sapiens (human)
|
267270 |
159062 |
12541
|
|
Homo sapiens neanderthalensis (Neandertal)
|
40 |
17 |
16
|
|
Hordeum vulgare (barley)
|
17 |
16 |
16
|
|
Human T-lymphotropic virus 1
|
78 |
77 |
4
|
|
Human T-lymphotropic virus 2
|
3 |
3 |
2
|
|
Human adenovirus C
|
9 |
9 |
6
|
|
Human adenovirus D
|
1 |
1 |
1
|
|
Human adenovirus E
|
10 |
9 |
5
|
|
Human astrovirus
|
1 |
1 |
1
|
|
Human coronavirus 229E
|
3 |
3 |
3
|
|
Human coronavirus HKU1
|
1 |
1 |
1
|
|
Human coronavirus NL63
|
3 |
3 |
2
|
|
Human enterovirus B
|
1 |
1 |
1
|
|
Human herpesvirus 1 (Herpes simplex virus type 1)
|
222 |
164 |
55
|
|
Human herpesvirus 2 (Herpes simplex virus type 2)
|
17 |
13 |
11
|
|
Human herpesvirus 3 (Varicella-zoster virus)
|
19 |
15 |
15
|
|
Human herpesvirus 4 (Epstein-Barr virus)
|
33 |
32 |
13
|
|
Human herpesvirus 4 type 1 (Epstein-Barr virus type 1)
|
176 |
169 |
32
|
|
Human herpesvirus 4 type 2 (Epstein-Barr virus type 2)
|
5 |
5 |
4
|
|
Human herpesvirus 5 (Human cytomegalovirus)
|
81 |
65 |
48
|
|
Human herpesvirus 6A
|
9 |
9 |
6
|
|
Human herpesvirus 6B
|
1 |
1 |
1
|
|
Human herpesvirus 7
|
2 |
1 |
2
|
|
Human herpesvirus 8 type M
|
51 |
46 |
21
|
|
Human herpesvirus 8 type P
|
50 |
45 |
18
|
|
Human immunodeficiency virus 1 (HIV-1)
|
734 |
702 |
9
|
|
Human immunodeficiency virus 2
|
15 |
14 |
5
|
|
Human metapneumovirus
|
10 |
8 |
4
|
|
Human papillomavirus
|
4 |
3 |
2
|
|
Human papillomavirus - 1
|
3 |
3 |
2
|
|
Human papillomavirus - 18
|
42 |
36 |
7
|
|
Human papillomavirus - cand90
|
2 |
2 |
2
|
|
Human papillomavirus type 16
|
150 |
133 |
8
|
|
Human papillomavirus type 26
|
1 |
1 |
1
|
|
Human papillomavirus type 5
|
2 |
2 |
2
|
|
Human papillomavirus type 53
|
1 |
1 |
1
|
|
Human parainfluenza virus 1
|
2 |
2 |
2
|
|
Human parainfluenza virus 2
|
2 |
2 |
1
|
|
Human parainfluenza virus 3
|
7 |
6 |
4
|
|
Human parvovirus B19
|
7 |
6 |
2
|
|
Human respiratory syncytial virus
|
13 |
13 |
7
|
|
Human spumaretrovirus
|
2 |
2 |
2
|
|
Infectious bronchitis virus
|
15 |
13 |
5
|
|
Infectious bursal disease virus (Gumboro virus)
|
5 |
5 |
2
|
|
Infectious hematopoietic necrosis virus
|
1 |
1 |
1
|
|
Infectious pancreatic necrosis virus
|
2 |
1 |
2
|
|
Infectious spleen and kidney necrosis virus
|
1 |
1 |
1
|
|
Influenza A virus (A/Goose/Guangdong/1/96(H5N1))
|
18 |
15 |
7
|
|
Influenza A virus (A/Hong Kong/1073/99(H9N2))
|
6 |
5 |
4
|
|
Influenza A virus (A/Korea/426/1968(H2N2))
|
4 |
4 |
2
|
|
Influenza A virus (A/New York/392/2004(H3N2))
|
3 |
3 |
3
|
|
Influenza A virus (A/Puerto Rico/8/34(H1N1))
|
28 |
22 |
9
|
|
Influenza B virus
|
7 |
7 |
5
|
|
Influenza C virus
|
4 |
4 |
4
|
|
JC polyomavirus
|
9 |
9 |
3
|
|
Jaagsiekte sheep retrovirus
|
5 |
5 |
2
|
|
Japanese encephalitis virus
|
6 |
6 |
1
|
|
Jembrana disease virus
|
1 |
1 |
1
|
|
Junin virus
|
4 |
4 |
1
|
|
Klebsiella pneumoniae
|
5 |
5 |
4
|
|
Klebsiella pneumoniae 342
|
3 |
3 |
3
|
|
Klebsiella pneumoniae NTUH-K2044
|
1 |
1 |
1
|
|
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
|
1 |
1 |
1
|
|
Kluyveromyces lactis NRRL Y-1140
|
5 |
5 |
5
|
|
La Crosse virus
|
2 |
2 |
1
|
|
Lactobacillus acidophilus NCFM
|
4 |
3 |
3
|
|
Lactobacillus casei ATCC 334
|
1 |
1 |
1
|
|
Lactobacillus casei BL23
|
3 |
3 |
3
|
|
Lactobacillus gasseri
|
1 |
1 |
1
|
|
Lactobacillus gasseri ATCC 33323
|
1 |
1 |
1
|
|
Lactobacillus johnsonii NCC 533
|
1 |
1 |
1
|
|
Lactobacillus plantarum
|
1 |
1 |
1
|
|
Lactobacillus plantarum WCFS1
|
7 |
6 |
6
|
|
Lactobacillus reuteri DSM 20016
|
2 |
2 |
2
|
|
Lactobacillus reuteri JCM 1112
|
2 |
2 |
1
|
|
Lactobacillus salivarius UCC118
|
1 |
1 |
1
|
|
Lactococcus lactis
|
5 |
5 |
4
|
|
Lactococcus lactis subsp. cremoris
|
1 |
1 |
1
|
|
Lactococcus lactis subsp. cremoris MG1363
|
7 |
6 |
6
|
|
Lactococcus lactis subsp. lactis
|
2 |
1 |
2
|
|
Lactococcus lactis subsp. lactis Il1403
|
31 |
26 |
23
|
|
Lactococcus lactis subsp. lactis bv. diacetylactis
|
1 |
1 |
1
|
|
Lactococcus phage TP901-1
|
1 |
1 |
1
|
|
Lactococcus phage bIL170
|
1 |
1 |
1
|
|
Lake Victoria marburgvirus
|
2 |
2 |
2
|
|
Laribacter hongkongensis
|
2 |
1 |
2
|
|
Lassa virus
|
1 |
1 |
1
|
|
Legionella pneumophila str. Corby
|
2 |
1 |
2
|
|
Legionella pneumophila str. Lens
|
2 |
2 |
2
|
|
Legionella pneumophila str. Paris
|
1 |
1 |
1
|
|
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
|
10 |
10 |
9
|
|
Leishmania infantum JPCM5
|
3 |
3 |
3
|
|
Leishmania major strain Friedlin
|
16 |
13 |
14
|
|
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
|
10 |
8 |
8
|
|
Leptospira interrogans serovar Lai str. 56601
|
4 |
4 |
4
|
|
Lettuce mosaic virus
|
1 |
1 |
1
|
|
Listeria innocua Clip11262
|
2 |
2 |
1
|
|
Listeria monocytogenes Clip81459
|
4 |
3 |
4
|
|
Listeria monocytogenes EGD-e
|
56 |
45 |
34
|
|
Listeria monocytogenes str. 4b F2365
|
15 |
13 |
9
|
|
Lotus japonicus
|
13 |
12 |
11
|
|
Lymphocystis disease virus - isolate China
|
1 |
1 |
1
|
|
Lymphocytic choriomeningitis virus
|
6 |
5 |
3
|
|
Macaca mulatta (rhesus monkey)
|
134 |
109 |
110
|
|
Macacine herpesvirus 3 (Rhesus cytomegalovirus)
|
1 |
1 |
1
|
|
Macacine herpesvirus 4 (Rhesus lymphocryptovirus)
|
1 |
1 |
1
|
|
Magnaporthe grisea 70-15
|
5 |
5 |
5
|
|
Magnetococcus sp. MC-1
|
1 |
1 |
1
|
|
Magnetospirillum magneticum AMB-1
|
2 |
2 |
2
|
|
Mammalian orthoreovirus 1
|
1 |
1 |
1
|
|
Mannheimia haemolytica PHL213
|
1 |
1 |
1
|
|
Mason-Pfizer monkey virus
|
2 |
2 |
1
|
|
Measles virus
|
30 |
26 |
5
|
|
Meleagris gallopavo (turkey)
|
10 |
7 |
9
|
|
Melon necrotic spot virus
|
7 |
2 |
5
|
|
Mesorhizobium loti MAFF303099
|
8 |
7 |
8
|
|
Metallosphaera sedula DSM 5348
|
17 |
1 |
17
|
|
Methanocaldococcus jannaschii DSM 2661
|
29 |
29 |
28
|
|
Methanococcoides burtonii DSM 6242
|
1 |
1 |
1
|
|
Methanococcus aeolicus Nankai-3
|
1 |
1 |
1
|
|
Methanococcus maripaludis S2
|
15 |
11 |
11
|
|
Methanosarcina acetivorans C2A
|
5 |
5 |
5
|
|
Methanosarcina barkeri str. Fusaro
|
6 |
4 |
6
|
|
Methanosarcina mazei Go1
|
10 |
9 |
10
|
|
Methanothermobacter thermautotrophicus str. Delta H
|
12 |
10 |
11
|
|
Methylococcus capsulatus str. Bath
|
3 |
3 |
3
|
|
Microplitis demolitor bracovirus
|
2 |
2 |
1
|
|
Minute virus of mice
|
5 |
5 |
2
|
|
Mokola virus
|
2 |
2 |
1
|
|
Molluscum contagiosum virus
|
1 |
1 |
1
|
|
Moloney murine leukemia virus
|
9 |
9 |
3
|
|
Monodelphis domestica (gray short-tailed opossum)
|
13 |
5 |
9
|
|
Moorella thermoacetica ATCC 39073
|
1 |
1 |
1
|
|
Mouse mammary tumor virus
|
2 |
2 |
1
|
|
Mumps virus
|
10 |
9 |
5
|
|
Mungbean yellow mosaic India virus
|
1 |
1 |
1
|
|
Murid herpesvirus 1 (Murine cytomegalovirus)
|
3 |
3 |
3
|
|
Murid herpesvirus 4 (Murine herpesvirus 68)
|
25 |
17 |
11
|
|
Murine hepatitis virus strain A59
|
20 |
19 |
6
|
|
Murine hepatitis virus strain JHM
|
2 |
2 |
1
|
|
Murine norovirus 1
|
1 |
1 |
1
|
|
Murine polyomavirus
|
3 |
3 |
3
|
|
Murine type C retrovirus
|
1 |
1 |
1
|
|
Murray Valley encephalitis virus
|
2 |
2 |
1
|
|
Mus musculus (house mouse)
|
84200 |
60090 |
9039
|
|
Mus musculus domesticus (western European house mouse)
|
2 |
2 |
2
|
|
Mus musculus molossinus (Japanese wild mouse)
|
2 |
2 |
2
|
|
Mus musculus musculus (eastern European house mouse)
|
4 |
3 |
2
|
|
Mycobacterium avium 104
|
4 |
3 |
4
|
|
Mycobacterium avium subsp. paratuberculosis K-10
|
6 |
4 |
6
|
|
Mycobacterium bovis AF2122/97
|
12 |
11 |
12
|
|
Mycobacterium bovis BCG str. Pasteur 1173P2
|
3 |
2 |
3
|
|
Mycobacterium leprae TN
|
6 |
6 |
5
|
|
Mycobacterium marinum M
|
1 |
1 |
1
|
|
Mycobacterium phage Bxb1
|
1 |
1 |
1
|
|
Mycobacterium phage L5
|
5 |
2 |
5
|
|
Mycobacterium smegmatis str. MC2 155
|
23 |
22 |
22
|
|
Mycobacterium tuberculosis CDC1551
|
6 |
6 |
6
|
|
Mycobacterium tuberculosis F11
|
1 |
1 |
1
|
|
Mycobacterium tuberculosis H37Ra
|
9 |
8 |
8
|
|
Mycobacterium tuberculosis H37Rv
|
566 |
475 |
332
|
|
Mycobacterium ulcerans Agy99
|
1 |
1 |
1
|
|
Mycoplasma agalactiae PG2
|
6 |
1 |
6
|
|
Mycoplasma arthritidis 158L3-1
|
1 |
1 |
1
|
|
Mycoplasma gallisepticum R
|
1 |
1 |
1
|
|
Mycoplasma genitalium G37
|
11 |
9 |
9
|
|
Mycoplasma hyopneumoniae 232
|
2 |
2 |
2
|
|
Mycoplasma mobile 163K
|
3 |
2 |
2
|
|
Mycoplasma mycoides subsp. mycoides SC str. PG1
|
1 |
1 |
1
|
|
Mycoplasma penetrans HF-2
|
1 |
1 |
1
|
|
Mycoplasma pneumoniae M129
|
22 |
16 |
18
|
|
Mycoplasma synoviae 53
|
1 |
1 |
1
|
|
Myxococcus xanthus DK 1622
|
17 |
12 |
13
|
|
Myxoma virus
|
6 |
6 |
6
|
|
Nasonia vitripennis (jewel wasp)
|
1 |
1 |
1
|
|
Natronomonas pharaonis DSM 2160
|
6 |
6 |
4
|
|
Necator americanus
|
1 |
1 |
1
|
|
Neisseria gonorrhoeae FA 1090
|
27 |
18 |
24
|
|
Neisseria gonorrhoeae NCCP11945
|
1 |
1 |
1
|
|
Neisseria meningitidis 053442
|
1 |
1 |
1
|
|
Neisseria meningitidis FAM18
|
1 |
1 |
1
|
|
Neisseria meningitidis MC58
|
32 |
27 |
28
|
|
Neisseria meningitidis Z2491
|
12 |
10 |
10
|
|
Nematostella vectensis (starlet sea anemone)
|
1 |
1 |
1
|
|
Neurospora crassa OR74A
|
69 |
58 |
45
|
|
Newcastle disease virus
|
15 |
11 |
4
|
|
Nicotiana tabacum (common tobacco)
|
6 |
5 |
5
|
|
Nipah virus
|
13 |
12 |
5
|
|
Nitrosomonas europaea ATCC 19718
|
3 |
3 |
3
|
|
Nocardia farcinica IFM 10152
|
2 |
2 |
2
|
|
Nodamura virus
|
1 |
1 |
1
|
|
Nostoc punctiforme PCC 73102
|
3 |
3 |
3
|
|
Nostoc sp. PCC 7120
|
44 |
32 |
37
|
|
Novosphingobium aromaticivorans DSM 12444
|
1 |
1 |
1
|
|
Odontoglossum ringspot virus
|
2 |
1 |
2
|
|
Oenococcus oeni PSU-1
|
2 |
2 |
2
|
|
Oncorhynchus mykiss (rainbow trout)
|
30 |
19 |
26
|
|
Orf virus
|
3 |
3 |
2
|
|
Ornithorhynchus anatinus (platypus)
|
1 |
1 |
1
|
|
Oryctolagus cuniculus (rabbit)
|
108 |
94 |
80
|
|
Oryza sativa Japonica Group (Japanese rice)
|
78 |
72 |
71
|
|
Oryzias latipes (Japanese medaka)
|
21 |
17 |
20
|
|
Ovine herpesvirus 2
|
1 |
1 |
1
|
|
Ovis aries (sheep)
|
434 |
299 |
250
|
|
Pan troglodytes (chimpanzee)
|
30 |
25 |
29
|
|
Panicum mosaic satellite virus
|
1 |
1 |
1
|
|
Panine herpesvirus 2 (Chimpanzee cytomegalovirus)
|
1 |
1 |
1
|
|
Papaya mosaic virus
|
2 |
2 |
1
|
|
Papaya ringspot virus
|
2 |
2 |
1
|
|
Papio anubis (olive baboon)
|
3 |
2 |
3
|
|
Parabacteroides distasonis ATCC 8503
|
10 |
1 |
10
|
|
Paracoccus denitrificans PD1222
|
8 |
6 |
6
|
|
Paramecium bursaria Chlorella virus 1
|
4 |
4 |
4
|
|
Paramecium tetraurelia strain d4-2
|
6 |
2 |
6
|
|
Pasteurella multocida
|
1 |
1 |
1
|
|
Pasteurella multocida subsp. multocida str. Pm70
|
4 |
4 |
3
|
|
Pea seed-borne mosaic virus
|
1 |
1 |
1
|
|
Peanut stunt virus
|
1 |
1 |
1
|
|
Pectobacterium atrosepticum SCRI1043
|
10 |
8 |
8
|
|
Pelobacter carbinolicus DSM 2380
|
1 |
1 |
1
|
|
Pelobacter propionicus DSM 2379
|
1 |
1 |
1
|
|
Penicillium marneffei ATCC 18224
|
2 |
1 |
2
|
|
Peste-des-petits-ruminants virus
|
2 |
2 |
2
|
|
Photorhabdus luminescens subsp. laumondii TTO1
|
2 |
2 |
2
|
|
Physcomitrella patens subsp. patens
|
2 |
1 |
2
|
|
Pichia stipitis CBS 6054
|
5 |
4 |
3
|
|
Picrophilus torridus DSM 9790
|
2 |
1 |
2
|
|
Plasmid ColE1
|
3 |
3 |
2
|
|
Plasmid F
|
5 |
3 |
5
|
|
Plasmid RSF1010
|
1 |
1 |
1
|
|
Plasmodium berghei str. ANKA
|
11 |
10 |
10
|
|
Plasmodium falciparum (malaria parasite P. falciparum)
|
5 |
5 |
1
|
|
Plasmodium falciparum 3D7
|
225 |
190 |
132
|
|
Plasmodium yoelii yoelii str. 17XNL
|
1 |
1 |
1
|
|
Plum pox virus
|
1 |
1 |
1
|
|
Pneumonia virus of mice J3666
|
1 |
1 |
1
|
|
Poliovirus
|
12 |
12 |
1
|
|
Pongo abelii (Sumatran orangutan)
|
1 |
1 |
1
|
|
Porcine circovirus 2
|
1 |
1 |
1
|
|
Porcine epidemic diarrhea virus
|
4 |
4 |
2
|
|
Porcine reproductive and respiratory syndrome virus
|
9 |
8 |
4
|
|
Porphyromonas gingivalis ATCC 33277
|
9 |
7 |
6
|
|
Porphyromonas gingivalis W83
|
25 |
19 |
23
|
|
Potato leafroll virus
|
2 |
2 |
2
|
|
Potato virus A
|
1 |
1 |
1
|
|
Potato virus X
|
2 |
2 |
2
|
|
Potato virus Y
|
3 |
3 |
1
|
|
Prochlorococcus marinus subsp. marinus str. CCMP1375
|
1 |
1 |
1
|
|
Proteus mirabilis HI4320
|
4 |
3 |
4
|
|
Proteus vulgaris
|
1 |
1 |
1
|
|
Prunus necrotic ringspot virus
|
1 |
1 |
1
|
|
Pseudoalteromonas haloplanktis TAC125
|
2 |
2 |
2
|
|
Pseudoalteromonas phage PM2
|
1 |
1 |
1
|
|
Pseudomonas aeruginosa
|
3 |
2 |
3
|
|
Pseudomonas aeruginosa PA7
|
6 |
4 |
6
|
|
Pseudomonas aeruginosa PAO1
|
344 |
252 |
230
|
|
Pseudomonas aeruginosa UCBPP-PA14
|
18 |
13 |
17
|
|
Pseudomonas fluorescens Pf-5
|
5 |
4 |
5
|
|
Pseudomonas fluorescens Pf0-1
|
2 |
2 |
2
|
|
Pseudomonas phage phi8
|
1 |
1 |
1
|
|
Pseudomonas putida
|
2 |
2 |
2
|
|
Pseudomonas putida F1
|
3 |
3 |
3
|
|
Pseudomonas putida KT2440
|
38 |
26 |
28
|
|
Pseudomonas sp. ADP
|
1 |
1 |
1
|
|
Pseudomonas stutzeri A1501
|
1 |
1 |
1
|
|
Pseudomonas syringae pv. phaseolicola 1448A
|
4 |
4 |
4
|
|
Pseudomonas syringae pv. syringae
|
2 |
1 |
2
|
|
Pseudomonas syringae pv. syringae B728a
|
5 |
5 |
5
|
|
Pseudomonas syringae pv. tomato str. DC3000
|
32 |
27 |
24
|
|
Puumala virus
|
2 |
2 |
1
|
|
Pyrobaculum aerophilum str. IM2
|
3 |
3 |
3
|
|
Pyrococcus abyssi GE5
|
9 |
8 |
8
|
|
Pyrococcus furiosus DSM 3638
|
34 |
32 |
29
|
|
Pyrococcus horikoshii OT3
|
61 |
55 |
50
|
|
Rabbit fibroma virus
|
1 |
1 |
1
|
|
Rabbit hemorrhagic disease virus
|
2 |
2 |
1
|
|
Rabies virus
|
9 |
9 |
5
|
|
Ralstonia eutropha H16
|
11 |
9 |
9
|
|
Ralstonia metallidurans CH34
|
2 |
2 |
2
|
|
Ralstonia solanacearum GMI1000
|
10 |
7 |
9
|
|
Raspberry bushy dwarf virus
|
1 |
1 |
1
|
|
Rattus norvegicus (Norway rat)
|
33472 |
23868 |
4586
|
|
Red clover necrotic mosaic virus
|
2 |
2 |
1
|
|
Respiratory syncytial virus
|
20 |
18 |
6
|
|
Reston ebolavirus
|
2 |
2 |
2
|
|
Reticuloendotheliosis virus
|
1 |
1 |
1
|
|
Rhizobium etli CFN 42
|
6 |
5 |
6
|
|
Rhizobium leguminosarum bv. viciae 3841
|
1 |
1 |
1
|
|
Rhizobium sp. NGR234
|
6 |
5 |
4
|
|
Rhodobacter sphaeroides 2.4.1
|
36 |
24 |
22
|
|
Rhodobacter sphaeroides ATCC 17029
|
6 |
6 |
3
|
|
Rhodococcus equi
|
3 |
1 |
3
|
|
Rhodococcus jostii RHA1
|
2 |
2 |
2
|
|
Rhodopseudomonas palustris CGA009
|
6 |
6 |
6
|
|
Rhodospirillum rubrum ATCC 11170
|
7 |
5 |
6
|
|
Rice dwarf virus
|
1 |
1 |
1
|
|
Rice stripe virus
|
1 |
1 |
1
|
|
Rickettsia conorii str. Malish 7
|
2 |
1 |
2
|
|
Rickettsia prowazekii str. Madrid E
|
1 |
1 |
1
|
|
Rickettsia typhi str. Wilmington
|
1 |
1 |
1
|
|
Rift Valley fever virus
|
2 |
2 |
2
|
|
Rinderpest virus (strain Kabete O)
|
2 |
2 |
1
|
|
Rotavirus A
|
3 |
3 |
3
|
|
Rotavirus C
|
1 |
1 |
1
|
|
Rotavirus G3
|
3 |
2 |
3
|
|
Rous sarcoma virus
|
10 |
10 |
2
|
|
Rubella virus
|
4 |
3 |
2
|
|
Ruegeria pomeroyi DSS-3
|
2 |
2 |
1
|
|
SARS coronavirus
|
134 |
121 |
10
|
|
Saccharomyces cerevisiae (baker's yeast)
|
6066 |
3960 |
2245
|
|
Saccharopolyspora erythraea NRRL 2338
|
2 |
1 |
2
|
|
Saimiriine herpesvirus 2 (Herpesvirus saimiri)
|
1 |
1 |
1
|
|
Salinibacter ruber DSM 13855
|
1 |
1 |
1
|
|
Salmo salar (Atlantic salmon)
|
8 |
8 |
7
|
|
Salmonella enterica subsp. enterica serovar Bovismorbificans
|
1 |
1 |
1
|
|
Salmonella enterica subsp. enterica serovar Choleraesuis
|
1 |
1 |
1
|
|
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
|
3 |
3 |
3
|
|
Salmonella enterica subsp. enterica serovar Dublin
|
1 |
1 |
1
|
|
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109
|
1 |
1 |
1
|
|
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
|
3 |
3 |
2
|
|
Salmonella enterica subsp. enterica serovar Newport str. SL254
|
2 |
2 |
1
|
|
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
|
4 |
4 |
3
|
|
Salmonella enterica subsp. enterica serovar Typhi str. CT18
|
29 |
18 |
26
|
|
Salmonella enterica subsp. enterica serovar Typhi str. Ty2
|
10 |
10 |
8
|
|
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
|
332 |
239 |
205
|
|
Sapovirus Mc10
|
3 |
3 |
1
|
|
Schizosaccharomyces pombe (fission yeast)
|
767 |
528 |
444
|
|
Schizosaccharomyces pombe 972h-
|
4 |
4 |
3
|
|
Sclerotinia sclerotiorum 1980
|
1 |
1 |
1
|
|
Semliki forest virus
|
15 |
15 |
2
|
|
Sendai virus
|
13 |
13 |
7
|
|
Sepik virus
|
1 |
1 |
1
|
|
Serratia marcescens
|
1 |
1 |
1
|
|
Sesbania mosaic virus
|
3 |
3 |
2
|
|
Sheeppox virus
|
1 |
1 |
1
|
|
Shewanella amazonensis SB2B
|
1 |
1 |
1
|
|
Shewanella oneidensis MR-1
|
17 |
14 |
12
|
|
Shewanella sp. ANA-3
|
7 |
1 |
7
|
|
Shigella dysenteriae Sd197
|
1 |
1 |
1
|
|
Shigella flexneri
|
27 |
24 |
13
|
|
Shigella flexneri 2a str. 2457T
|
6 |
6 |
6
|
|
Shigella flexneri 2a str. 301
|
17 |
14 |
15
|
|
Shigella flexneri 5 str. 8401
|
3 |
2 |
3
|
|
Shrimp white spot syndrome virus
|
8 |
6 |
7
|
|
Simian foamy virus
|
1 |
1 |
1
|
|
Simian immunodeficiency virus
|
25 |
24 |
7
|
|
Simian immunodeficiency virus SIV-mnd 2
|
4 |
3 |
3
|
|
Simian virus 40
|
30 |
28 |
5
|
|
Simian virus 5
|
5 |
5 |
2
|
|
Simian-Human immunodeficiency virus
|
1 |
1 |
1
|
|
Sin Nombre virus
|
2 |
2 |
1
|
|
Sindbis virus
|
6 |
6 |
3
|
|
Singapore grouper iridovirus
|
1 |
1 |
1
|
|
Sinorhizobium meliloti 1021
|
60 |
40 |
52
|
|
Solanum lycopersicum (tomato)
|
77 |
62 |
66
|
|
Sonchus yellow net virus
|
1 |
1 |
1
|
|
Sorangium cellulosum 'So ce 56'
|
1 |
1 |
1
|
|
Soybean mosaic virus
|
2 |
2 |
1
|
|
Spinacia oleracea (spinach)
|
2 |
1 |
2
|
|
Spiroplasma citri
|
1 |
1 |
1
|
|
Spodoptera frugiperda MNPV
|
1 |
1 |
1
|
|
Spodoptera frugiperda ascovirus 1a
|
1 |
1 |
1
|
|
Spodoptera litura NPV
|
4 |
4 |
2
|
|
Staphylococcus aureus
|
10 |
9 |
7
|
|
Staphylococcus aureus RF122
|
12 |
9 |
5
|
|
Staphylococcus aureus subsp. aureus COL
|
28 |
23 |
22
|
|
Staphylococcus aureus subsp. aureus MRSA252
|
34 |
33 |
23
|
|
Staphylococcus aureus subsp. aureus MW2
|
13 |
9 |
11
|
|
Staphylococcus aureus subsp. aureus Mu3
|
5 |
4 |
3
|
|
Staphylococcus aureus subsp. aureus Mu50
|
26 |
20 |
19
|
|
Staphylococcus aureus subsp. aureus N315
|
23 |
20 |
21
|
|
Staphylococcus aureus subsp. aureus NCTC 8325
|
17 |
15 |
14
|
|
Staphylococcus aureus subsp. aureus USA300_FPR3757
|
13 |
11 |
8
|
|
Staphylococcus aureus subsp. aureus USA300_TCH1516
|
8 |
7 |
8
|
|
Staphylococcus aureus subsp. aureus str. Newman
|
10 |
8 |
10
|
|
Staphylococcus epidermidis ATCC 12228
|
2 |
2 |
2
|
|
Staphylococcus epidermidis RP62A
|
12 |
11 |
10
|
|
Staphylococcus haemolyticus JCSC1435
|
2 |
1 |
2
|
|
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
|
1 |
1 |
1
|
|
Staphylococcus sciuri
|
1 |
1 |
1
|
|
Staphylococcus warneri
|
1 |
1 |
1
|
|
Stenotrophomonas maltophilia K279a
|
1 |
1 |
1
|
|
Streptococcus agalactiae 2603V/R
|
4 |
3 |
4
|
|
Streptococcus agalactiae A909
|
8 |
7 |
6
|
|
Streptococcus agalactiae NEM316
|
5 |
4 |
4
|
|
Streptococcus equi subsp. zooepidemicus MGCS10565
|
1 |
1 |
1
|
|
Streptococcus gordonii str. Challis substr. CH1
|
4 |
4 |
4
|
|
Streptococcus mutans UA159
|
60 |
46 |
55
|
|
Streptococcus phage Cp-1
|
1 |
1 |
1
|
|
Streptococcus pneumoniae ATCC 700669
|
1 |
1 |
1
|
|
Streptococcus pneumoniae CGSP14
|
3 |
1 |
3
|
|
Streptococcus pneumoniae D39
|
32 |
26 |
22
|
|
Streptococcus pneumoniae R6
|
53 |
46 |
43
|
|
Streptococcus pneumoniae TIGR4
|
10 |
10 |
9
|
|
Streptococcus pyogenes
|
2 |
2 |
2
|
|
Streptococcus pyogenes M1 GAS
|
38 |
29 |
24
|
|
Streptococcus pyogenes MGAS10394
|
3 |
3 |
3
|
|
Streptococcus pyogenes MGAS315
|
6 |
5 |
6
|
|
Streptococcus pyogenes MGAS5005
|
9 |
7 |
8
|
|
Streptococcus pyogenes MGAS6180
|
1 |
1 |
1
|
|
Streptococcus pyogenes MGAS8232
|
6 |
5 |
5
|
|
Streptococcus pyogenes MGAS9429
|
4 |
4 |
4
|
|
Streptococcus pyogenes str. Manfredo
|
2 |
2 |
2
|
|
Streptococcus suis 05ZYH33
|
1 |
1 |
1
|
|
Streptococcus suis 98HAH33
|
1 |
1 |
1
|
|
Streptococcus thermophilus CNRZ1066
|
3 |
2 |
3
|
|
Streptomyces avermitilis MA-4680
|
2 |
2 |
2
|
|
Streptomyces clavuligerus ATCC 27064
|
2 |
2 |
2
|
|
Streptomyces coelicolor A3(2)
|
92 |
71 |
77
|
|
Streptomyces phage phiC31
|
1 |
1 |
1
|
|
Streptomyces venezuelae
|
1 |
1 |
1
|
|
Strongylocentrotus purpuratus (purple sea urchin)
|
46 |
39 |
43
|
|
Sudan ebolavirus
|
1 |
1 |
1
|
|
Sugarcane mosaic virus
|
2 |
2 |
1
|
|
Suid herpesvirus 1 (Pseudorabies virus)
|
21 |
16 |
17
|
|
Sulfolobus acidocaldarius DSM 639
|
4 |
2 |
4
|
|
Sulfolobus islandicus
|
4 |
2 |
3
|
|
Sulfolobus islandicus filamentous virus
|
1 |
1 |
1
|
|
Sulfolobus solfataricus P2
|
65 |
57 |
47
|
|
Sulfolobus tokodaii str. 7
|
13 |
13 |
13
|
|
Sus scrofa (pig)
|
1255 |
966 |
720
|
|
Synechococcus elongatus PCC 6301
|
10 |
10 |
10
|
|
Synechococcus elongatus PCC 7942
|
9 |
7 |
7
|
|
Synechococcus sp. CC9311
|
1 |
1 |
1
|
|
Synechococcus sp. CC9902
|
1 |
1 |
1
|
|
Synechococcus sp. RCC307
|
1 |
1 |
1
|
|
Synechococcus sp. WH 8102
|
9 |
7 |
6
|
|
Synechocystis sp. PCC 6803
|
122 |
105 |
91
|
|
Tacaribe virus
|
1 |
1 |
1
|
|
Taeniopygia guttata (zebra finch)
|
5 |
5 |
4
|
|
Takifugu rubripes (torafugu)
|
19 |
17 |
18
|
|
Tanapox virus
|
1 |
1 |
1
|
|
Theilovirus
|
1 |
1 |
1
|
|
Thermoanaerobacter tengcongensis MB4
|
11 |
10 |
11
|
|
Thermobifida fusca YX
|
2 |
1 |
2
|
|
Thermococcus kodakarensis KOD1
|
14 |
11 |
9
|
|
Thermoplasma acidophilum DSM 1728
|
12 |
11 |
12
|
|
Thermosynechococcus elongatus BP-1
|
19 |
17 |
15
|
|
Thermotoga maritima MSB8
|
82 |
71 |
74
|
|
Thermotoga petrophila RKU-1
|
1 |
1 |
1
|
|
Thermus thermophilus HB27
|
23 |
20 |
22
|
|
Thermus thermophilus HB8
|
87 |
81 |
78
|
|
Thogoto virus
|
1 |
1 |
1
|
|
Tick-borne encephalitis virus
|
3 |
3 |
1
|
|
Tobacco etch virus
|
1 |
1 |
1
|
|
Tobacco mosaic virus
|
11 |
11 |
3
|
|
Tobacco rattle virus
|
2 |
2 |
2
|
|
Tomato aspermy virus
|
2 |
2 |
1
|
|
Tomato bushy stunt virus
|
11 |
9 |
3
|
|
Tomato golden mosaic virus
|
1 |
1 |
1
|
|
Tomato leaf curl New Delhi virus
|
1 |
1 |
1
|
|
Tomato leaf curl virus
|
1 |
1 |
1
|
|
Tomato mosaic virus
|
1 |
1 |
1
|
|
Tomato spotted wilt virus
|
2 |
2 |
1
|
|
Tomato yellow leaf curl Sardinia virus
|
1 |
1 |
1
|
|
Tomato yellow leaf curl virus
|
1 |
1 |
1
|
|
Transmissible gastroenteritis virus
|
2 |
2 |
2
|
|
Treponema denticola ATCC 35405
|
9 |
6 |
6
|
|
Treponema pallidum subsp. pallidum str. Nichols
|
7 |
5 |
7
|
|
Tribolium castaneum (red flour beetle)
|
24 |
16 |
22
|
|
Trichomonas vaginalis G3
|
2 |
2 |
2
|
|
Triticum aestivum (bread wheat)
|
64 |
53 |
50
|
|
Trypanosoma brucei TREU927
|
67 |
56 |
61
|
|
Trypanosoma cruzi strain CL Brener
|
26 |
26 |
23
|
|
Tula virus
|
1 |
1 |
1
|
|
Turkey coronavirus
|
1 |
1 |
1
|
|
Turnip crinkle virus
|
1 |
1 |
1
|
|
Turnip mosaic virus
|
3 |
3 |
1
|
|
Turnip yellow mosaic virus
|
1 |
1 |
1
|
|
UR2 sarcoma virus
|
1 |
1 |
1
|
|
Ureaplasma parvum serovar 3 str. ATCC 700970
|
1 |
1 |
1
|
|
Ustilago maydis 521
|
5 |
4 |
5
|
|
Vaccinia virus
|
64 |
56 |
43
|
|
Variola virus (smallpox virus)
|
1 |
1 |
1
|
|
Venezuelan equine encephalitis virus
|
2 |
2 |
2
|
|
Vesicular stomatitis Indiana virus
|
16 |
14 |
5
|
|
Vibrio cholerae AM-19226
|
5 |
2 |
5
|
|
Vibrio cholerae MO10
|
1 |
1 |
1
|
|
Vibrio cholerae O1 biovar El Tor str. N16961
|
30 |
26 |
26
|
|
Vibrio cholerae O395
|
22 |
19 |
21
|
|
Vibrio fischeri ES114
|
12 |
9 |
9
|
|
Vibrio harveyi ATCC BAA-1116
|
2 |
2 |
1
|
|
Vibrio parahaemolyticus RIMD 2210633
|
17 |
13 |
10
|
|
Vibrio vulnificus CMCP6
|
8 |
5 |
8
|
|
Vibrio vulnificus YJ016
|
1 |
1 |
1
|
|
Visna/Maedi virus
|
1 |
1 |
1
|
|
Vitis vinifera (wine grape)
|
5 |
3 |
5
|
|
West Nile virus
|
23 |
22 |
2
|
|
Wheat streak mosaic virus
|
1 |
1 |
1
|
|
Wolbachia endosymbiont of Drosophila melanogaster
|
1 |
1 |
1
|
|
Wolinella succinogenes DSM 1740
|
2 |
1 |
2
|
|
Xanthobacter autotrophicus Py2
|
1 |
1 |
1
|
|
Xanthomonas axonopodis pv. citri str. 306
|
13 |
12 |
11
|
|
Xanthomonas campestris pv. campestris str. 8004
|
18 |
12 |
17
|
|
Xanthomonas campestris pv. campestris str. ATCC 33913
|
24 |
15 |
20
|
|
Xanthomonas campestris pv. campestris str. B100
|
2 |
2 |
2
|
|
Xanthomonas campestris pv. vesicatoria str. 85-10
|
8 |
8 |
7
|
|
Xanthomonas oryzae pv. oryzae KACC10331
|
8 |
7 |
8
|
|
Xanthomonas oryzae pv. oryzae PXO99A
|
2 |
2 |
2
|
|
Xenopus (Silurana) tropicalis (western clawed frog)
|
88 |
69 |
84
|
|
Xenopus laevis (African clawed frog)
|
1099 |
829 |
696
|
|
Xylella fastidiosa 9a5c
|
2 |
2 |
2
|
|
Xylella fastidiosa Temecula1
|
3 |
2 |
3
|
|
Yaba monkey tumor virus
|
1 |
1 |
1
|
|
Yaba-like disease virus
|
1 |
1 |
1
|
|
Yarrowia lipolytica CLIB122
|
5 |
3 |
5
|
|
Yellow fever virus
|
5 |
5 |
1
|
|
Yersinia enterocolitica
|
19 |
18 |
14
|
|
Yersinia enterocolitica subsp. enterocolitica 8081
|
7 |
5 |
5
|
|
Yersinia pestis
|
4 |
4 |
2
|
|
Yersinia pestis CO92
|
12 |
11 |
11
|
|
Yersinia pestis KIM
|
33 |
27 |
26
|
|
Yersinia pestis biovar Microtus str. 91001
|
2 |
2 |
2
|
|
Yersinia phage PY54
|
1 |
1 |
1
|
|
Yersinia pseudotuberculosis IP 31758
|
1 |
1 |
1
|
|
Yersinia pseudotuberculosis IP 32953
|
9 |
5 |
9
|
|
Yersinia pseudotuberculosis PB1/+
|
2 |
1 |
2
|
|
Zaire ebolavirus
|
15 |
14 |
6
|
|
Zea mays (maize)
|
125 |
109 |
105
|
|
Zucchini yellow mosaic virus
|
2 |
2 |
1
|
|
Zymomonas mobilis subsp. mobilis ZM4
|
5 |
4 |
4
|
| Totals |
431333 |
262461 |
49644 |
Entrez
