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GeneRIF Statistics

As of January 05, 2009

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Totals

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377468 GeneRIFs  
235202 Distinct publications  
45724 Genes carrying GeneRIFs  
768 Taxa with GeneRIFs  

(What's being counted?)

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History

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Graph of number of GeneRIFs over time Graph of number of Publications over time Graph of number of Genes over time Graph of number of Taxa over time
GeneRIFs Publications Genes Taxa
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Counts by Source

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Source GeneRIFs Distinct
Publications
Genes Taxa
NLM Index Section 307832 210182 44084 751
NIAID HIV project 35 65 21 2
EcoGene 874 778 874 1
HuGENet 64659 37771 4269 1
General public 4068 2945 3034 112
Totals 377468 235202 45724 768
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Counts by Organism

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Organism GeneRIFs Distinct
Publications
Genes
Abelson murine leukemia virus 2 2 1
Acidithiobacillus ferrooxidans 1 1 1
Acidithiobacillus ferrooxidans ATCC 53993 1 1 1
Acinetobacter sp. ADP1 1 1 1
Actinobacillus pleuropneumoniae serovar 3 str. JL03 2 2 2
Actinobacillus pleuropneumoniae serovar 7 str. AP76 1 1 1
Adeno-associated virus - 1 1 1 1
Adeno-associated virus - 2 14 7 9
Aedes aegypti (yellow fever mosquito) 3 3 3
Aeromonas hydrophila subsp. hydrophila ATCC 7966 1 1 1
Aeromonas phage Aeh1 2 1 2
Aeromonas salmonicida subsp. salmonicida 1 1 1
Aeropyrum pernix K1 14 13 13
African cassava mosaic virus 1 1 1
African horsesickness virus 1 1 1
African swine fever virus 8 8 6
Agrobacterium rhizogenes 1 1 1
Agrobacterium tumefaciens 16 13 11
Agrobacterium tumefaciens str. C58 47 36 42
Ajellomyces capsulatus NAm1 1 1 1
Alcelaphine herpesvirus 1 (wildebeest herpesvirus) 1 1 1
Alfalfa mosaic virus 1 1 1
Alkalilimnicola ehrlichei MLHE-1 1 1 1
Anabaena variabilis ATCC 29413 1 1 1
Andes virus 2 2 1
Anopheles gambiae str. PEST 33 27 27
Anticarsia gemmatalis nucleopolyhedrovirus 1 1 1
Apis mellifera (honey bee) 49 41 40
Apple latent spherical virus 1 1 1
Aquifex aeolicus VF5 18 16 15
Arabidopsis thaliana (thale cress) 3829 2788 2253
Archaeoglobus fulgidus DSM 4304 21 20 20
Arthrobacter nitroguajacolicus 1 1 1
Artibeus jamaicensis (Jamaican fruit-eating bat) 1 1 1
Ashbya gossypii ATCC 10895 3 3 3
Aspergillus clavatus NRRL 1 1 1 1
Aspergillus fumigatus Af293 32 30 28
Aspergillus nidulans FGSC A4 25 20 21
Aspergillus niger CBS 513.88 1 1 1
Aspergillus oryzae RIB40 1 1 1
Autographa californica nucleopolyhedrovirus 17 15 12
Avian metapneumovirus 2 2 1
Azoarcus sp. BH72 1 1 1
Azorhizobium caulinodans ORS 571 1 1 1
BK polyomavirus 2 2 1
Bacillus amyloliquefaciens FZB42 2 2 2
Bacillus anthracis str. 'Ames Ancestor' 32 26 15
Bacillus anthracis str. A2012 2 2 2
Bacillus anthracis str. Ames 9 5 8
Bacillus anthracis str. Sterne 4 3 4
Bacillus cereus ATCC 10987 4 4 3
Bacillus cereus ATCC 14579 15 15 11
Bacillus cereus E33L 8 8 7
Bacillus cereus subsp. cytotoxis NVH 391-98 1 1 1
Bacillus halodurans C-125 7 7 7
Bacillus licheniformis ATCC 14580 6 6 5
Bacillus phage GA-1 1 1 1
Bacillus phage PZA 7 6 6
Bacillus phage SPP1 1 1 1
Bacillus phage phi29 2 2 2
Bacillus subtilis subsp. subtilis str. 168 455 335 326
Bacillus thuringiensis 1 1 1
Bacillus thuringiensis serovar israelensis 6 5 3
Bacillus thuringiensis serovar konkukian str. 97-27 3 2 3
Bacteroides fragilis NCTC 9343 3 3 3
Bacteroides thetaiotaomicron VPI-5482 2 2 2
Bamboo mosaic virus 1 1 1
Banna virus 1 1 1
Barley stripe mosaic virus 1 1 1
Bartonella quintana str. Toulouse 3 1 3
Bdellovibrio bacteriovorus HD100 1 1 1
Beet curly top virus 1 1 1
Beet necrotic yellow vein virus 1 1 1
Beet yellows virus 2 2 1
Bhendi yellow vein mosaic virus 1 1 1
Bhendi yellow vein mosaic virus satellite DNA beta 1 1 1
Bifidobacterium longum NCC2705 2 2 2
Blackcurrant reversion virus 1 1 1
Bluetongue virus 6 6 6
Bombyx mori (domestic silkworm) 64 48 54
Bombyx mori NPV 9 9 7
Bordetella bronchiseptica RB50 10 7 9
Bordetella parapertussis 12822 2 1 2
Bordetella pertussis Tohama I 17 15 9
Borna disease virus 7 7 4
Borrelia afzelii PKo 2 2 2
Borrelia burgdorferi B31 63 43 31
Borrelia garinii PBi 2 2 1
Bos indicus (zebu) 2 2 2
Bos taurus (cattle) 2255 1758 988
Bovine coronavirus 3 1 3
Bovine ephemeral fever virus 2 1 2
Bovine herpesvirus 1 17 15 9
Bovine herpesvirus 5 1 1 1
Bovine immunodeficiency virus 3 3 2
Bovine papillomavirus - 1 18 16 6
Bovine papular stomatitis virus 1 1 1
Bovine respiratory syncytial virus 1 1 1
Bovine viral diarrhea virus 1 5 5 1
Bradyrhizobium japonicum USDA 110 31 24 26
Brome mosaic virus 3 2 2
Brucella abortus bv. 1 str. 9-941 5 4 5
Brucella melitensis 16M 2 2 2
Brucella melitensis biovar Abortus 2308 10 4 10
Brucella suis 1330 11 7 10
Bunyamwera virus 1 1 1
Burkholderia cenocepacia AU 1054 2 2 2
Burkholderia mallei ATCC 23344 2 2 2
Burkholderia multivorans ATCC 17616 1 1 1
Burkholderia pseudomallei K96243 9 8 6
Burkholderia thailandensis E264 1 1 1
Burkholderia xenovorans LB400 5 4 4
Caenorhabditis elegans (nematode) 1749 1230 1017
Campylobacter coli 1 1 1
Campylobacter jejuni RM1221 1 1 1
Campylobacter jejuni subsp. jejuni 81-176 3 3 3
Campylobacter jejuni subsp. jejuni 81116 1 1 1
Campylobacter jejuni subsp. jejuni NCTC 11168 40 30 39
Candida albicans SC5314 89 73 76
Candida glabrata CBS 138 7 4 7
Candidatus Pelagibacter ubique HTCC1062 1 1 1
Canine distemper virus 3 3 2
Canine parvovirus 1 1 1
Canis lupus familiaris (dog) 752 565 481
Carboxydothermus hydrogenoformans Z-2901 1 1 1
Cauliflower mosaic virus 1 1 1
Caulobacter crescentus CB15 51 28 42
Cercopithecine herpesvirus 9 (Simian varicella virus) 1 1 1
Cereal yellow dwarf virus - RPS 1 1 1
Chicken anemia virus 8 8 1
Chlamydia muridarum Nigg 2 2 2
Chlamydia trachomatis A/HAR-13 2 2 2
Chlamydia trachomatis D/UW-3/CX 11 9 9
Chlamydia trachomatis L2b/UCH-1/proctitis 3 3 3
Chlamydomonas reinhardtii 30 26 27
Chlamydophila abortus S26/3 1 1 1
Chlamydophila pneumoniae AR39 5 5 5
Chlamydophila pneumoniae CWL029 4 4 4
Chlamydophila pneumoniae TW-183 2 2 2
Chlorobium tepidum TLS 21 12 19
Chromobacterium violaceum ATCC 12472 3 1 3
Ciona intestinalis 34 25 29
Citrus tristeza virus 2 2 2
Classical swine fever virus 10 10 1
Clostridium acetobutylicum ATCC 824 11 8 11
Clostridium botulinum A str. ATCC 3502 2 2 2
Clostridium botulinum B1 str. Okra 1 1 1
Clostridium botulinum F str. Langeland 1 1 1
Clostridium difficile 630 8 4 6
Clostridium kluyveri DSM 555 2 2 2
Clostridium perfringens 2 2 2
Clostridium perfringens ATCC 13124 2 2 2
Clostridium perfringens SM101 2 2 2
Clostridium perfringens str. 13 14 12 9
Clostridium tetani E88 2 2 2
Clostridium thermocellum ATCC 27405 2 1 2
Colwellia psychrerythraea 34H 1 1 1
Corynebacterium diphtheriae NCTC 13129 10 8 7
Corynebacterium glutamicum ATCC 13032 58 45 55
Corynebacterium glutamicum R 4 3 4
Corynebacterium jeikeium 1 1 1
Cottontail rabbit papillomavirus 1 1 1
Cowpea chlorotic mottle virus 1 1 1
Cowpox virus 1 1 1
Cryptococcus neoformans var. neoformans JEC21 16 14 10
Cryptosporidium hominis TU502 1 1 1
Cryptosporidium parvum Iowa II 2 2 2
Cucumber mosaic virus (cucumber mosaic cucumovirus) 7 5 4
Cucumber necrosis virus 1 1 1
Culex quinquefasciatus (southern house mosquito) 1 1 1
Cymbidium mosaic virus 1 1 1
Cypovirus 1 1 1 1
Danio rerio (zebrafish) 2096 1512 1300
Debaryomyces hansenii CBS767 1 1 1
Deinococcus geothermalis DSM 11300 2 2 2
Deinococcus radiodurans R1 29 27 25
Dengue virus 1 3 3 1
Dengue virus 2 13 13 1
Dengue virus 4 1 1 1
Desulfovibrio desulfuricans subsp. desulfuricans str. G20 3 3 3
Desulfovibrio vulgaris DP4 1 1 1
Desulfovibrio vulgaris str. Hildenborough 14 11 14
Dichelobacter nodosus VCS1703A 2 1 2
Dictyostelium discoideum AX4 71 58 59
Drosophila melanogaster (fruit fly) 6434 4473 2194
Drosophila mojavensis 1 1 1
Drosophila virilis 5 5 5
East African cassava mosaic Cameroon virus 1 1 1
Eastern equine encephalitis virus 1 1 1
Ectocarpus siliculosus virus 1 1 1 1
Ectromelia virus 3 2 3
Ehrlichia ruminantium str. Welgevonden 1 1 1
Emiliania huxleyi virus 86 1 1 1
Encephalitozoon cuniculi GB-M1 4 4 3
Encephalomyocarditis virus 1 1 1
Entamoeba histolytica HM-1:IMSS 10 10 8
Enterobacteria phage 933W 2 2 2
Enterobacteria phage M13 2 2 2
Enterobacteria phage MS2 1 1 1
Enterobacteria phage Mu 1 1 1
Enterobacteria phage N15 4 4 4
Enterobacteria phage N4 1 1 1
Enterobacteria phage P1 6 5 4
Enterobacteria phage P2 1 1 1
Enterobacteria phage P22 7 7 5
Enterobacteria phage P4 2 1 2
Enterobacteria phage RB69 4 4 1
Enterobacteria phage T3 1 1 1
Enterobacteria phage T4 56 46 38
Enterobacteria phage T5 1 1 1
Enterobacteria phage T7 17 16 6
Enterobacteria phage lambda 13 10 9
Enterococcus faecalis 6 6 4
Enterococcus faecalis V583 12 8 12
Enterococcus faecium 1 1 1
Epiphyas postvittana NPV 1 1 1
Equid herpesvirus 1 (Equine herpesvirus 1) 3 3 2
Equine arteritis virus 3 3 1