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Volume 11(1);  2024 Dec

Reviews

Enzyme engineering for functional lipids synthesis: recent advance and perspective
Ailin Guan, Yue Hou, Run Yang, Jiufu Qin
Bioresour Bioprocess. 2024 Dec; 11(1): 1. Published online 2024 Jan 2. doi: 10.1186/s40643-023-00723-7
PMCID:
PMC10992173
Article PDF–1.4M
Trends and challenges of fruit by-products utilization: insights into safety, sensory, and benefits of the use for the development of innovative healthy food: a review
Md. Mehedi Hasan, Md. Rakibul Islam, Ahmed Redwan Haque, Md. Raihan Kabir, Khursheda Jahan Khushe, S. M. Kamrul Hasan
Bioresour Bioprocess. 2024 Dec; 11(1): 10. Published online 2024 Jan 18. doi: 10.1186/s40643-023-00722-8
PMCID:
PMC10991904
Article PDF–1.7M
Lotus (Nelumbo nucifera): a multidisciplinary review of its cultural, ecological, and nutraceutical significance
Hang Yang, Simai He, Qi Feng, Zisen Liu, Shibin Xia, Qiaohong Zhou, Zhenbin Wu, Yi Zhang
Bioresour Bioprocess. 2024 Dec; 11(1): 18. Published online 2024 Jan 27. doi: 10.1186/s40643-024-00734-y
PMCID:
PMC10991372
Article PDF–2.2M
Recent advances in the biosynthesis and industrial biotechnology of Gamma-amino butyric acid
Ripon Baroi Milon, Pengchen Hu, Xueqiong Zhang, Xuechao Hu, Lujing Ren
Bioresour Bioprocess. 2024 Dec; 11(1): 32. Published online 2024 Mar 16. doi: 10.1186/s40643-024-00747-7
PMCID:
PMC10992975
Article PDF–2.2M
Anaerobic digestion of process water from hydrothermal treatment processes: a review of inhibitors and detoxification approaches
Mei Zhou, Kayode Taiwo, Han Wang, Jean-Nepomuscene Ntihuga, Largus T. Angenent, Joseph G. Usack
Bioresour Bioprocess. 2024 Dec; 11(1): 47. Published online 2024 May 7. doi: 10.1186/s40643-024-00756-6
PMCID:
PMC11076452
Article PDF–4.8M

Research

Nitric oxide mediates red light-induced perylenequinone production in Shiraia mycelium culture
Wen Juan Wang, Xin Ping Li, Wen Hao Shen, Qun Yan Huang, Rui Peng Cong, Li Ping Zheng, Jian Wen Wang
Bioresour Bioprocess. 2024 Dec; 11(1): 2. Published online 2024 Jan 2. doi: 10.1186/s40643-023-00725-5
PMCID:
PMC10991179
Article PDF–8.3M
Eco-friendly nano-enabled fertilizers derived from date industry waste for sustainable and controlled-release of P, K and Mg nutrients: sorption mechanisms, controlled-release performance and kinetics
Samira S. Elsabagh, Elsayed A. Elkhatib, Mohamed Rashad
Bioresour Bioprocess. 2024 Dec; 11(1): 3. Published online 2024 Jan 3. doi: 10.1186/s40643-023-00716-6
PMCID:
PMC10991569
Article PDF–4.6M
Enhanced bioethanol production by evolved Escherichia coli LGE2-H in a microbial electrolysis cell system
Cong Wang, Dongdong Chang, Qi Zhang, Zhisheng Yu
Bioresour Bioprocess. 2024 Dec; 11(1): 4. Published online 2024 Jan 3. doi: 10.1186/s40643-023-00717-5
PMCID:
PMC10992536
Article PDF–1.9M
Harnessing the potential of pigeonpea and maize feedstock biochar for carbon sequestration, energy generation, and environmental sustainability
Nallagatla Vinod Kumar, Gajanan Sawargaonkar, C. Sudha Rani, Rajesh Pasumarthi, Santhosh Kale, T. Ram Prakash, S. Triveni, Ajay Singh, Moses Shyam Davala, Rohan Khopade, Rayapati Karthik, Bathula Venkatesh, Mandapelli Sharath Chandra
Bioresour Bioprocess. 2024 Dec; 11(1): 5. Published online 2024 Jan 3. doi: 10.1186/s40643-023-00719-3
PMCID:
PMC10992794
Article PDF–1.8M
A circuitous route for in vitro multi-enzyme cascade production of cytidine triphosphate to overcome the thermodynamic bottleneck
Zonglin Li, Yahui Zhong, Zhoulei Qing, Zhimin Li
Bioresour Bioprocess. 2024 Dec; 11(1): 6. Published online 2024 Jan 4. doi: 10.1186/s40643-023-00724-6
PMCID:
PMC10992187
Article PDF–1.4M
Immobilization of Thermomyces lanuginosus lipase in a novel polysaccharide-based hydrogel by a two-step crosslinking method and its use in the lauroylation of α-arbutin
Ming Chen, Weina She, Xin Zhao, Cheng Chen, Benwei Zhu, Yun Sun, Zhong Yao
Bioresour Bioprocess. 2024 Dec; 11(1): 7. Published online 2024 Jan 4. doi: 10.1186/s40643-023-00721-9
PMCID:
PMC10991105
Article PDF–2.2M
Utilization of microalgae for agricultural runoff remediation and sustainable biofuel production through an integrated biorefinery approach
Qurrat ul ain Rana, Saira Latif, Saleha Perveen, Abdul Haq, Sidra Ali, Muhammad Irfan, Rahul Gauttam, Tawaf Ali Shah, Turki M. Dawoud, Gezahign Fentahun Wondmie, Mohammed Bourhia, Malik Badshah
Bioresour Bioprocess. 2024 Dec; 11(1): 8. Published online 2024 Jan 11. doi: 10.1186/s40643-023-00720-w
PMCID:
PMC10992472
Article PDF–2.0M
Biotransformation of 2-keto-4-hydroxybutyrate via aldol condensation using an efficient and thermostable carboligase from Deinococcus radiodurans
Yeon-Ju Jeong, Min-Ju Seo, Bong Hyun Sung, Jeong-Sun Kim, Soo-Jin Yeom
Bioresour Bioprocess. 2024 Dec; 11(1): 9. Published online 2024 Jan 16. doi: 10.1186/s40643-024-00727-x
PMCID:
PMC10992282
Article PDF–1.4M
Integrated characterization of filler tobacco leaves: HS–SPME–GC–MS, E-nose, and microbiome analysis across different origins
Mingzhu Zhang, Dongfeng Guo, Haiqing Wang, Guanglong Wu, Naihong Ding, Yaqi Shi, Jinlong Zhou, Eryong Zhao, Xingjiang Li
Bioresour Bioprocess. 2024 Dec; 11(1): 11. Published online 2024 Jan 18. doi: 10.1186/s40643-024-00728-w
PMCID:
PMC10992047
Article PDF–7.8M
Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock
Natalia Carreno-Quintero, Takayuki Tohge, Rebecca Van Acker, Lauren S. McKee, Qi Zhou, Antje Bolze, Xiaohui Xing, Merve Özparpucu, Markus Rüggeberg, Thomas Piofczyk, Yaw Koram, Vincent Bulone, Wout Boerjan, Alisdair R. Fernie, Paul D. Fraser
Bioresour Bioprocess. 2024 Dec; 11(1): 12. Published online 2024 Jan 18. doi: 10.1186/s40643-023-00726-4
PMCID:
PMC10991672
Article PDF–1.2M
Intervention mechanism of marine-based chito-oligosaccharide on acute liver injury induced by AFB1 in rats
Lin Chen, Jiahui Yan, Huijun Shi, Zhaohuan Zhang, YueLiang Zhao, Yong Zhao, Yuan Wang, Jie Ou
Bioresour Bioprocess. 2024 Dec; 11(1): 13. Published online 2024 Jan 18. doi: 10.1186/s40643-023-00708-6
PMCID:
PMC10992386
Article PDF–5.0M
Enhanced lignin degradation by Irpex lacteus through expanded sterilization further improved the fermentation quality and microbial community during the silage preservation process
Xiaohui Cao, Rui Cai, Sasa Zuo, Dongze Niu, Fuyu Yang, Chuncheng Xu
Bioresour Bioprocess. 2024 Dec; 11(1): 14. Published online 2024 Jan 22. doi: 10.1186/s40643-024-00730-2
PMCID:
PMC10992542
Article PDF–3.6M
In vitro study on antioxidant and lipid-lowering activities of tobacco polysaccharides
Shuaishuai Chang, Xiao Lei, Qiang Xie, Mingjin Zhang, Yuangai Zhang, Jiaxin Xi, Jiyou Duan, Jian Ge, Fuzhao Nian
Bioresour Bioprocess. 2024 Dec; 11(1): 15. Published online 2024 Jan 23. doi: 10.1186/s40643-024-00729-9
PMCID:
PMC10992464
Article PDF–2.8M
Dynamic immobilization of bacterial cells on biofilm in a polyester nonwoven chemostat
Chao-Lei Zhang, Chao Wang, Yue-Sheng Dong, Ya-Qin Sun, Zhi-Long Xiu
Bioresour Bioprocess. 2024 Dec; 11(1): 17. Published online 2024 Jan 24. doi: 10.1186/s40643-024-00732-0
PMCID:
PMC10992621
Article PDF–2.4M
Production of biliverdin by biotransformation of exogenous heme using recombinant Pichia pastoris cells
Jianfeng Mei, Yanchao Han, Shihang Zhuang, Zhikai Yang, Yu Yi, Guoqing Ying
Bioresour Bioprocess. 2024 Dec; 11(1): 19. Published online 2024 Feb 1. doi: 10.1186/s40643-024-00736-w
PMCID:
PMC10992137
Article PDF–2.3M
Expression of chitosanase from Aspergillus fumigatus chitosanase in Saccharomyces cerevisiae by CRISPR-Cas9 tools
Qingshuai Zhang, Hui Cao
Bioresour Bioprocess. 2024 Dec; 11(1): 20. Published online 2024 Feb 2. doi: 10.1186/s40643-023-00718-4
PMCID:
PMC10992968
Article PDF–1.1M
Collagen type II solution extracted from supercritical carbon dioxide decellularized porcine cartilage: regenerative efficacy on post-traumatic osteoarthritis model
Srinivasan Periasamy, Yun-Ju Chen, Dur-Zong Hsu, Dar-Jen Hsieh
Bioresour Bioprocess. 2024 Dec; 11(1): 21. Published online 2024 Feb 3. doi: 10.1186/s40643-024-00731-1
PMCID:
PMC10992551
Article PDF–8.4M
Wheat flour-derived amyloid fibrils for efficient removal of organic dyes from contaminated water
Dan-Dan Yang, Fu-Xiang Chang, Bo-Fan Zhang, Yang-Chun Yong
Bioresour Bioprocess. 2024 Dec; 11(1): 22. Published online 2024 Feb 14. doi: 10.1186/s40643-024-00737-9
PMCID:
PMC10991873
Article PDF–1.5M
Spatial monitoring of hydrolysis in a plug-flow bioreactor: a support for flexible operation?
Theresa Menzel, Peter Neubauer, Stefan Junne
Bioresour Bioprocess. 2024 Dec; 11(1): 23. Published online 2024 Feb 14. doi: 10.1186/s40643-024-00740-0
PMCID:
PMC10992403
Article PDF–3.6M
Optimization of Clostridium beijerinckii semi-solid fermentation of rape straw to produce butyric acid by genome analysis
Hui Kou, Jia Zheng, Guangbin Ye, Zongwei Qiao, Kaizheng Zhang, Huibo Luo, Wei Zou
Bioresour Bioprocess. 2024 Dec; 11(1): 24. Published online 2024 Feb 14. doi: 10.1186/s40643-024-00742-y
PMCID:
PMC10992193
Article PDF–3.7M
Modeling the behavior of monoclonal antibodies on hydrophobic interaction chromatography resins
Douglas Nolan, Thomas R. Chin, Mick Eamsureya, Sheldon Oppenheim, Olga Paley, Christina Alves, George Parks
Bioresour Bioprocess. 2024 Dec; 11(1): 25. Published online 2024 Feb 15. doi: 10.1186/s40643-024-00738-8
PMCID:
PMC10991917
Article PDF–6.9M
Rationally introducing non-canonical amino acids to enhance catalytic activity of LmrR for Henry reaction
Lan Wang, Mengting Zhang, Haidong Teng, Zhe Wang, Shulin Wang, Pengcheng Li, Jianping Wu, Lirong Yang, Gang Xu
Bioresour Bioprocess. 2024 Dec; 11(1): 26. Published online 2024 Feb 29. doi: 10.1186/s40643-024-00744-w
PMCID:
PMC10992053
Article PDF–4.0M
Potential use of Ulva intestinalis-derived biochar adsorbing phosphate ions in the cultivation of winter wheat Tristicum aestivum
Natalia Niedzbała, Ewa Lorenc-Grabowska, Piotr Rutkowski, Jacek Chęcmanowski, Anna Szymczycha-Madeja, Maja Wełna, Izabela Michalak
Bioresour Bioprocess. 2024 Dec; 11(1): 27. Published online 2024 Mar 4. doi: 10.1186/s40643-024-00741-z
PMCID:
PMC10992812
Article PDF–2.3M
Optimization of fungicidal and acaricidal metabolite production by endophytic fungus Aspergillus sp. SPH2
Nicolas Reyes Castillo, Carmen E. Díaz, M. Fe Andres, Juan Imperial, Félix Valcárcel, Ana Azucena González Coloma
Bioresour Bioprocess. 2024 Dec; 11(1): 28. Published online 2024 Mar 5. doi: 10.1186/s40643-024-00745-9
PMCID:
PMC10992823
Article PDF–2.0M
Enhancing the endo-activity of the thermophilic chitinase to yield chitooligosaccharides with high degrees of polymerization
Feifei Guan, Xiaoqian Tian, Ruohan Zhang, Yan Zhang, Ningfeng Wu, Jilu Sun, Honglian Zhang, Tao Tu, Huiying Luo, Bin Yao, Jian Tian, Huoqing Huang
Bioresour Bioprocess. 2024 Dec; 11(1): 29. Published online 2024 Mar 7. doi: 10.1186/s40643-024-00735-x
PMCID:
PMC10991111
Article PDF–2.3M
Optimisation of sugar and solid biofuel co-production from almond tree prunings by acid pretreatment and enzymatic hydrolysis
Manuel Cuevas-Aranda, Mª Lourdes Martínez-Cartas, Fahd Mnasser, Adnan Asad Karim, Sebastián Sánchez
Bioresour Bioprocess. 2024 Dec; 11(1): 30. Published online 2024 Mar 11. doi: 10.1186/s40643-024-00743-x
PMCID:
PMC10991225
Article PDF–3.9M
Enhanced enzymatic sugar production from corn stover by combination of water extraction and glycerol-assisted instant catapult steam explosion
Fengqin Wang, Hongli Dong, Weiwei Yu, Yinling Gao, Guotao Mao, Yanxia An, Hui Xie, Andong Song, Zhanying Zhang
Bioresour Bioprocess. 2024 Dec; 11(1): 31. Published online 2024 Mar 14. doi: 10.1186/s40643-024-00739-7
PMCID:
PMC10992945
Article PDF–1.3M
Identification, heterologous expression and characterization of a new unspecific peroxygenase from Marasmius fiardii PR-910
Xin Fu, Kexin Lin, Xiaodong Zhang, Zhiyong Guo, Lixin Kang, Aitao Li
Bioresour Bioprocess. 2024 Dec; 11(1): 33. Published online 2024 Mar 27. doi: 10.1186/s40643-024-00751-x
PMCID:
PMC10992195
Article PDF–3.3M
Effect of adaptive laboratory evolution of engineered Escherichia coli in acetate on the biosynthesis of succinic acid from glucose in two-stage cultivation
Jiaping Jiang, Yuanchan Luo, Peng Fei, Zhengtong Zhu, Jing Peng, Juefeng Lu, Du Zhu, Hui Wu
Bioresour Bioprocess. 2024 Dec; 11(1): 34. Published online 2024 Apr 5. doi: 10.1186/s40643-024-00749-5
PMCID:
PMC10997558
Article PDF–2.5M
Potential of hospital wastewater treatment using locally isolated Chlorella sp. LH2 from cocoon wastewater
Tu Thi Anh Le, Truong Nguyen
Bioresour Bioprocess. 2024 Dec; 11(1): 35. Published online 2024 Apr 6. doi: 10.1186/s40643-024-00748-6
PMCID:
PMC10998823
Article PDF–1.6M
Separation of microalgae from bacterial contaminants using spiral microchannel in the presence of a chemoattractant
Leticia F. Ngum, Y. Matsushita, Samir F. El-Mashtoly, Ahmed M. R. Fath El-Bab, Ahmed L Abdel-Mawgood
Bioresour Bioprocess. 2024 Dec; 11(1): 36. Published online 2024 Apr 13. doi: 10.1186/s40643-024-00746-8
PMCID:
PMC11016047
Article PDF–3.6M
Efficient expression of an alkaline pectin lyase from Bacillus licheniformis in Pichia pastoris
Junyi Li, Manli Yang, Fengguang Zhao, Yaping Zhang, Shuangyan Han
Bioresour Bioprocess. 2024 Dec; 11(1): 37. Published online 2024 Apr 15. doi: 10.1186/s40643-024-00752-w
PMCID:
PMC11018594
Article PDF–7.8M
A straightforward chemobiocatalytic route for one-pot valorization of glucose into 2,5-bis(hydroxymethyl)furan
Xuan-Ping Liao, Qian Wu, Min-Hua Zong, Ning Li
Bioresour Bioprocess. 2024 Dec; 11(1): 38. Published online 2024 Apr 18. doi: 10.1186/s40643-024-00758-4
PMCID:
PMC11026326
Article PDF–3.6M
Enhancing the biosynthesis of polyunsaturated fatty acids by Rhodotorula mucilaginosa and Lodderomyces elongisporus
Amera A. Abaza, Yousseria M. Shetaia, Noha M. Sorour, Ashraf S. A. El-Sayed, Ashraf F. El-Baz
Bioresour Bioprocess. 2024 Dec; 11(1): 39. Published online 2024 Apr 18. doi: 10.1186/s40643-024-00755-7
PMCID:
PMC11026325
Article PDF–2.7M
Nutrients, surfactants, and aeration in constructed wetlands affect bacterial persistence and metabolic activity during the remediation of crude oil-contaminated water
Amer Jamal Hashmat, Muhammad Afzal, Samina Iqbal, Imran Amin, Carlos Alberto Arias, Hans Brix, Imran Zafar, Sania Riaz, Rizwan ur Rehman, Ahmad Mohammad Salamatullah, Gezahign Fentahun Wondmie, Mohammed Bourhia
Bioresour Bioprocess. 2024 Dec; 11(1): 40. Published online 2024 Apr 20. doi: 10.1186/s40643-024-00757-5
PMCID:
PMC11031516
Article PDF–2.4M
Kinetics and synthesis of poly(3-hydroxybutyrate) by a putative-mutant of Bacillus licheniformis
Sikander Ali, Faiza Shabbir Lodhi, M. Usman Ahmad, Qaiser Farid Khan, Asad-ur-Rehman, Abeera Ahmed, Iram Liaqat, M. Nauman Aftab, Tawaf Ali Shah, Ahmad Mohammad Salamatullah, Gezahign Fentahun Wondmie, Mohammed Bourhia
Bioresour Bioprocess. 2024 Dec; 11(1): 41. Published online 2024 Apr 22. doi: 10.1186/s40643-024-00750-y
PMCID:
PMC11033250
Article PDF–2.1M
Plant endophytic fungi exhibit diverse biotransformation pathways of mogrosides and show great potential application in siamenoside I production
Wenxi Lin, Qiang Jiang, Yamin Dong, Yiwen Xiao, Ya Wang, Boliang Gao, Du Zhu
Bioresour Bioprocess. 2024 Dec; 11(1): 42. Published online 2024 Apr 23. doi: 10.1186/s40643-024-00754-8
PMCID:
PMC11039582
Article PDF–7.1M
Reconstruction the feedback regulation of amino acid metabolism to develop a non-auxotrophic l-threonine producing Corynebacterium glutamicum
Jianhang Liu, Jiao Liu, Jiajun Li, Xiaojia Zhao, Guannan Sun, Qianqian Qiao, Tuo Shi, Bin Che, Jiuzhou Chen, Qianqian Zhuang, Yu Wang, Jibin Sun, Deqiang Zhu, Ping Zheng
Bioresour Bioprocess. 2024 Dec; 11(1): 43. Published online 2024 Apr 26. doi: 10.1186/s40643-024-00753-9
PMCID:
PMC11045695
Article PDF–3.8M
Co-production of 1,3-propanediol and phage phiKpS2 from the glycerol fermentation by Klebsiella pneumoniae
Suyang Duan, Zhirong Zhang, Xiaoli Wang, Yaqin Sun, Yuesheng Dong, Lina Ren, Lili Geng, Zhilong Xiu
Bioresour Bioprocess. 2024 Dec; 11(1): 44. Published online 2024 May 9. doi: 10.1186/s40643-024-00760-w
PMCID:
PMC11082122
Article PDF–1.4M
Detailed analysis of agro-industrial byproducts/wastes to enable efficient sorting for various agro-industrial applications
Govindegowda Priyanka, Jeevan R. Singiri, Zachor Adler-Agmon, Sasank Sannidhi, Spurthi Daida, Nurit Novoplansky, Gideon Grafi
Bioresour Bioprocess. 2024 Dec; 11(1): 45. Published online 2024 May 4. doi: 10.1186/s40643-024-00763-7
PMCID:
PMC11069496
Article PDF–4.4M
Microwave-ultrasonic assisted extraction of lignin to synthesize new nano micellar organometallic surfactants for refining oily wastewater
M. H. Alhalafi, S. A. Rizk, E. S. Al-Malki, A. M. Algohary
Bioresour Bioprocess. 2024 Dec; 11(1): 46. Published online 2024 May 6. doi: 10.1186/s40643-024-00761-9
PMCID:
PMC11074075
Article PDF–3.7M

Short Report

Scanning the active center of formolase to identify key residues for enhanced C1 to C3 bioconversion
Guimin Cheng, Hongbing Sun, Qian Wang, Jinxing Yang, Jing Qiao, Cheng Zhong, Tao Cai, Yu Wang
Bioresour Bioprocess. 2024 Dec; 11(1): 48. Published online 2024 May 12. doi: 10.1186/s40643-024-00767-3
PMCID:
PMC11089019
Article PDF–2.3M

Correction

Correction: Protection of navy-bean bioactive peptides within nanoliposomes: morphological, structural and biological changes
Nazila Zeynali Namdar, Leila Roufegarinejad, Ainaz Alizadeh, Narmela Asefi, Seid Mahdi Jafari, Khashayar Sarabandi
Bioresour Bioprocess. 2024 Dec; 11(1): 16. Published online 2024 Jan 24. doi: 10.1186/s40643-024-00733-z
Corrects:
Bioresour Bioprocess. 2023 Dec; 10(1): 87.
PMCID:
PMC10992301
Correction PDF–586K
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