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AnoSag2.1

Organism name:
Anolis sagrei ordinatus (Brown anole)
Isolate:
Geneva1000
Sex:
female
BioSample:
SAMN29589363
BioProject:
PRJNA783271
Submitter:
Rutgers University
Date:
2022/10/05
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_025583915.1 (latest)
RefSeq assembly accession:
GCF_025583915.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JANCLY01
Assembly method:
meraculous v. 2.2.2.5; HiRise v. 2.1.6-072ca03871cc; SSPACE-LongRead scaffolder v. 1.1
Expected final version:
yes
Genome coverage:
100.0x
Sequencing technology:
Illumina HiSeq

IDs: 14063721 [UID] 36527298 [GenBank] 49330788 [RefSeq]

See Genome Information for Anolis sagrei

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,926,425,113
Total ungapped length1,894,932,052
Gaps between scaffolds0
Number of scaffolds3,738
Scaffold N50253,587,442
Scaffold L504
Number of contigs32,328
Contig N50208,754
Contig L502,628
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,738

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,926,425,1133,7381,894,932,052253,587,44228,5900