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icAetTumi1.1

Organism name:
Aethina tumida (small hive beetle)
Isolate:
Nest 87
Sex:
male
BioSample:
SAMN27531685
BioProject:
PRJNA825637
Submitter:
USDA Ag100Pest
Date:
2022/07/22
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_024364675.1 (latest)
RefSeq assembly accession:
GCF_024364675.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JALKMD01
Assembly method:
HiFiASM v. 0.15.1-r334
Expected final version:
yes
Genome coverage:
85x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_024364635.1 (alternate pseudohaplotype of diploid)

IDs: 13334771 [UID] 34816298 [GenBank] 35058978 [RefSeq]

See Genome Information for Aethina tumida

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length259,984,281
Total ungapped length259,981,381
Total number of chromosomes and plasmids9

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_024364685.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CM044479.1=NC_065435.1
Chromosome 2CM044480.1=NC_065436.1
Chromosome 3CM044481.1=NC_065437.1
Chromosome 4CM044482.1=NC_065438.1
Chromosome 5CM044483.1=NC_065439.1
Chromosome 6CM044484.1=NC_065440.1
Chromosome 7CM044485.1=NC_065441.1
Chromosome 8CM044486.1=NC_065442.1

Assembly statistics

MoleculeTotal
Length
All259,967,705
Chromosome 180,394,605
Chromosome 238,819,551
Chromosome 336,783,356
Chromosome 429,747,793
Chromosome 528,945,603
Chromosome 619,919,672
Chromosome 718,230,250
Chromosome 87,126,875
MoleculeTotal
Length
Mitochondrion MT16,576