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YSA_version1

Organism name:
Sipha flava (yellow sugarcane aphid)
Isolate:
LNK
BioSample:
SAMN09230380
BioProject:
PRJNA472250
Submitter:
USDA-ARS Center for Grain and Animal Health Research
Date:
2018/06/26
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003268045.1 (latest)
RefSeq assembly accession:
GCF_003268045.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: 2 unlocalized scaffolds on chromosome MT
  • Data displayed for RefSeq version
WGS Project:
QGMW01
Assembly method:
Supernova v. 2
Expected final version:
yes
Genome coverage:
60.0x
Sequencing technology:
Illumina HiSeq

IDs: 1775181 [UID] 6730268 [GenBank] 6752468 [RefSeq]

See Genome Information for Sipha flava

History (Show revision history)

Comment

Global statistics

Total sequence length353,179,758
Total ungapped length347,913,480
Gaps between scaffolds0
Number of scaffolds1,923
Scaffold N501,686,648
Scaffold L5067
Number of contigs5,193
Contig N50163,055
Contig L50630
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,923

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced353,179,7581,923347,913,4801,686,6483,2700