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ChrAsi1.0

Organism name:
Chrysochloris asiatica (Cape golden mole)
Sex:
female
BioSample:
SAMN00744889
BioProject:
PRJNA74591
Submitter:
Broad Institute
Date:
2012/09/19
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000296735.1 (latest)
RefSeq assembly accession:
GCF_000296735.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
AMDV01
Assembly method:
allpaths v. R42316 HAPLOIDIFY=True
Genome coverage:
66x
Sequencing technology:
Illumina Hi-Seq

IDs: 426138 [UID] 426138 [GenBank] 941438 [RefSeq]

See Genome Information for Chrysochloris asiatica

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Sequenced and assembled at the Broad Institute. Samples were provided by Dr. Terence J Robinson, Evolutionary Genomics Group, Department of Biology & Zoology, University of Stellenbosch, South Africa.

Global statistics

Total sequence length4,210,110,458
Total ungapped length3,363,564,316
Gaps between scaffolds0
Number of scaffolds20,500
Scaffold N5013,470,186
Scaffold L5085
Number of contigs391,344
Contig N5019,631
Contig L5047,031
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)391,344

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,210,093,80620,4993,363,547,66413,470,186370,8440
MoleculeTotal
Length
Mitochondrion MT16,652