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Adig_1.1

Organism name:
Acropora digitifera (stony corals)
BioSample:
SAMD00004206
BioProject:
PRJDA67425
Submitter:
Okinawa Institute of Science and Technology
Date:
2016/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000222465.2 (latest)
RefSeq assembly accession:
GCF_000222465.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
BACK02
Assembly method:
GS De Novo Assembler v. 2.3; SOAP; SSPACE
Genome coverage:
150X
Sequencing technology:
454 GS FLX; Illumina Genome Analyzer

IDs: 625641 [UID] 2806218 [GenBank] 2941688 [RefSeq]

See Genome Information for Acropora digitifera

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length447,497,157
Total ungapped length379,288,049
Gaps between scaffolds0
Number of scaffolds2,421
Scaffold N50483,559
Scaffold L50272
Number of contigs54,401
Contig N5010,915
Contig L5010,162
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)54,401

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced447,478,6782,420379,269,570483,55951,9800
MoleculeTotal
Length
Mitochondrion MT18,479